Gene omics information

Query gene ID Os03g0182800
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8395.8Os03g0182800AY323478.1-Ethylene responsive element binding factor3(OsERF3)5e-2At2g44840ERF13 (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13)S.X.H.G.
0.9198.9Os03g0432100AK065739.1-Pyruvate, phosphate dikinase, chloroplastprecursor (EC 2.7.9.1) (Pyruvate, orthophosphatedikinase)5e-59At4g15530PPDK (pyruvate orthophosphate dikinase)S.X.H.G.
0.8395.8Os03g0226200U76031.1-Non-symbiotic hemoglobin 2 (rHb2) (ORYsa GLB1b)8e+0At5g02200FHL (FAR-RED-ELONGATED HYPOCOTYL1-LIKE)S.X.H.G.
0.7391.1Os07g0604600AK062832.1-B12D family protein2e-2At1g06475unknown proteinS.X.H.G.
0.6079.7Os01g0185500NM_189612.1-RmlC-like cupin family protein9e-2At5g39890unknown proteinS.X.H.G.
0.5068.0Os02g0802500AK064361.1-H(+)-translocating (Pyrophosphate-ENERGIZED)inorganic pyrophosphatase beta-1 polypeptide (EC 3.6.1.1)(Fragment)3e-57At1g15690AVP1S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
34.899.8GSM159272Rice coleoptiles, 4 days old, anoxic, REPLICATE 2 (Sample #12)GSE6908Transcript Profiling of the Aerobic and Anoxic Rice Coleoptile
32.299.7GSM159271Rice coleoptiles, 4 days old, anoxic, REPLICATE 1 (Sample #11)GSE6908Transcript Profiling of the Aerobic and Anoxic Rice Coleoptile
25.699.5GSM359922Pokkali root, salt-treated, biological replicate 1GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
24.799.4GSM359923Pokkali root, salt-treated, biological replicate 2GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
18.999.0GSM359924Pokkali root, salt-treated, biological replicate 3GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
18.499.0GSM359903FL478 root, control, biological replicate 2GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
15.298.7GSM359914IR63731 root, control, biological replicate 2GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
15.198.6GSM359920Pokkali root, control, biological replicate 2GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
13.898.5GSM154938Root_tZ-treatment_30min_replicate 3GSE6719Cytokinin responsive genes in rice
13.198.4GSM154937Root_tZ-treatment_30min_replicate 2GSE6719Cytokinin responsive genes in rice
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.087e-1273Os12g0168100AK107125.1-AP2 domain containing protein RAP2.6 (Fragment)1e-5At1g43160RAP2.6 (related to AP2 6)C.G.S.X.
0.072e-24115Os07g0617000AK109360.2-Ethylene responsive element binding factor 5(AtERF5)5e-8At3g14230RAP2.2C.G.S.X.
0.073e-1791Os02g0654700AK073812.1-Ethylene-responsive element binding protein3e-3At5g47220ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2)C.G.S.X.
0.061e-1069Os02g0655200AY339378.1-Ethylene responsive element binding factor3(OsERF3)2e-1At4g27950CRF4 (CYTOKININ RESPONSE FACTOR 4)C.G.S.X.
0.036e-963Os07g0410300AK108503.1-Conserved hypothetical protein3e-2At1g06160ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.045e-240Arabidopsis thalianaAt2g44840819093ERF13 (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13)encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.---C.G.S.X.
0.044e-654Glycine maxGmaAffx.53033.1.S1_atBG046837--2e-6At3g23240ERF1 (ETHYLENE RESPONSE FACTOR 1)C.G.S.X.
0.114e-756Hordeum vulgareContig11448_atContig11448--5e-1At5g55507hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.046e-240Populus trichocarpaPtpAffx.221100.1.S1_atpmrna37697AP2/ERF domain-containing transcription factor-9e-20At2g44840ERF13 (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13)C.G.S.X.
0.102e-448Triticum aestivumTaAffx.116140.1.S1_atCA728150--3e-1At5g44210ERF9 (ERF DOMAIN PROTEIN 9)C.G.S.X.
0.042e-446Vitis vinifera1609683_atCF604955hypothetical protein LOC100249982-2e-11At2g47520AP2 domain-containing transcription factor, putativeC.G.S.X.
0.083e-1065Zea maysZm.8626.1.A1_atBM348921hypothetical protein LOC100274398-1e+0At5g61600ethylene-responsive element-binding family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006355Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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