CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os03g0158300

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os03g0158300 AK066591.1 - Conserved hypothetical protein 3e+0 At1g07950 surfeit locus protein 5 family protein / SURF5 family protein S.X. H.G.
0.67 87.2 Os07g0105600 AK068377.1 - Photosystem II oxygen evolving complex proteinPsbQ family protein 1e-1 At5g56840 DNA-binding family protein S.X. H.G.
0.60 79.7 Os01g0676200 AK070436.1 - Conserved hypothetical protein 2e+0 At4g13720 inosine triphosphate pyrophosphatase, putative / HAM1 family protein S.X. H.G.
0.46 60.9 Os02g0751600 AK072946.1 - Peptidylprolyl isomerase, FKBP-type domaincontaining protein 4e-2 At5g03030 DNAJ heat shock N-terminal domain-containing protein S.X. H.G.
0.44 58.1 Os01g0323300 CA760263 - Conserved hypothetical protein 3e-1 At1g54200 unknown protein S.X. H.G.
0.18 13.7 Os04g0514400 AK108112.1 - Peptidoglycan binding-like domain containingprotein 4e-1 At5g57070 hydroxyproline-rich glycoprotein family protein S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
20.6 99.1 GSM207567 Mudanjiang8 wild type control rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
19.9 99.1 GSM207565 Mudanjiang8 wild type control rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
17.4 98.9 GSM207566 Mudanjiang8 wild type control rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
16.4 98.8 GSM207559 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
16.0 98.7 GSM267999 Green leaves in F9G RILs from parents lines GSE10872 Molecular characterization and genetic analysis reveal SA0420 as an early senescing rice mutant with pleotropic
15.0 98.6 GSM207560 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
13.1 98.4 GSM207563 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
11.7 98.2 GSM421675 XOC, 8 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
11.5 98.2 GSM421678 XOC, 8 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
11.4 98.2 GSM207564 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 6e-15 83 Os03g0158200 CR290189 - DEAD/DEAH box helicase, N-terminal domaincontaining protein 2e-10 At3g53110 LOS4 (LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4) C.G. S.X.
0.02 9e-5 50 Os05g0154400 9633.m00543 - - 9e-3 At3g10040 transcription factor C.G. S.X.
0.02 9e-5 50 Os07g0625800 AK103419.1 - Plant lipid transfer protein/Par allergen familyprotein 1e-1 At2g17870 cold-shock DNA-binding family protein C.G. S.X.
0.02 9e-5 50 Os10g0481500 9638.m02989 - Conserved hypothetical protein 8e-7 At5g64870 - C.G. S.X.
0.02 3e-4 48 Os12g0150700 9640.m00469 - Purple acid phosphatase 6e-4 At3g52810 PAP21 (PURPLE ACID PHOSPHATASE 21) C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 3e+0 34 Arabidopsis thaliana At1g07950 837310 surfeit locus protein 5 family protein / SURF5 family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFO - - - C.G. S.X.
0.02 2e-1 38 Glycine max HgAffx.24194.2.S1_at CD749026 - - 2e+0 At5g58590 RANBP1 (RAN BINDING PROTEIN 1) C.G. S.X.
0.48 9e-116 416 Hordeum vulgare Contig5198_s_at Contig5198 - - 5e+0 At4g02130 GATL6 C.G. S.X.
0.02 9e-1 36 Populus trichocarpa PtpAffx.72485.1.S1_at BP928874 hypothetical protein - 2e-8 At5g24400 emb2024 (embryo defective 2024) C.G. S.X.
0.24 5e-45 182 Triticum aestivum Ta.7900.1.A1_at BQ160883 - - 3e+0 At5g49500 signal recognition particle 54 kDa protein 2 / SRP54 (SRP-54B) C.G. S.X.
0.02 2e-1 36 Vitis vinifera 1610294_at CF373126 - - 4e-13 At4g25835 AAA-type ATPase family protein C.G. S.X.
0.02 3e-4 46 Zea mays Zm.17352.1.A1_at CF636500 - - 4e+0 At5g53030 unknown protein C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage