CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os03g0154000

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.88 96.8 Os03g0154000 AK103088.1 - Aromatic-ring hydroxylase family protein 3e+0 At3g13882 structural constituent of ribosome S.X. H.G.
0.82 95.0 Os10g0528300 AF309378.1 - Tau class GST protein 4 2e-4 At3g43800 ATGSTU27 (GLUTATHIONE S-TRANSFERASE TAU 27) S.X. H.G.
0.80 94.6 Os10g0528400 AF309379.1 - Glutathione S-transferase, C-terminal domaincontaining protein 1e-1 At1g10370 ERD9 (EARLY-RESPONSIVE TO DEHYDRATION 9) S.X. H.G.
0.75 91.9 Os10g0530900 AF309376.1 - Glutathione S-transferase GST 30 (EC 2.5.1.18) 2e+0 At1g18680 HNH endonuclease domain-containing protein S.X. H.G.
0.71 89.6 Os03g0283200 AF237487.2 - IN2-1 protein 2e+0 At5g02780 In2-1 protein, putative S.X. H.G.
0.67 87.2 Os01g0638000 AK103824.1 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 1e-2 At1g22380 AtUGT85A3 (UDP-glucosyl transferase 85A3) S.X. H.G.
0.67 87.2 Os10g0527400 D10861.1 - Glutathione S-transferase TSI-1 (EC 2.5.1.18)(Glutathione S- transferase 1) 5e-1 At2g29450 ATGSTU5 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 5) S.X. H.G.
0.57 77.0 Os01g0627400 AK074025.1 - Cytochrome P450 monooxygenase CYP72A5 (Fragment) 4e+0 At3g14630 CYP72A9 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
61.1 99.9 GSM100446 Rice Bala 1ppm Arsenate Rep2 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
45.1 99.9 GSM100445 Rice Bala 1ppm Arsenate Rep1 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
36.4 99.8 GSM100442 Rice Azucena 1ppm Arsenate Rep2 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
35.2 99.8 GSM149412 Rice Bala 1ppm Arsenate Rep3 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
33.6 99.8 GSM100441 Rice Azucena 1ppm Arsenate Rep1 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
21.0 99.2 GSM275408 Bala root tip_At the wax layer_rep1 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
20.8 99.2 GSM149410 Rice Azucena 1ppm Arsenate Rep3 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
20.7 99.2 GSM275409 Bala root tip_At the wax layer_rep2 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
11.7 98.2 GSM195224 Suspension cell GSE7951 Genome-wide gene expression profiling of rice stigma
8.7 97.8 GSM275407 Azucena root tip_At the wax layer_rep3 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.36 2e-40 169 Os03g0153900 AK106420.1 - Aromatic-ring hydroxylase family protein 3e+0 At3g23255 unknown protein C.G. S.X.
0.23 1e-41 173 Os03g0154100 AK106358.1 - Aromatic-ring hydroxylase family protein 3e+0 At5g53880 unknown protein C.G. S.X.
0.06 2e-3 46 Os04g0423100 9632.m03324 - Aromatic-ring hydroxylase family protein 5e-1 At5g16380 unknown protein C.G. S.X.
0.03 2e-3 46 Os07g0491900 9635.m03031 - Flavoprotein monooxygenase domain containingprotein 5e-5 At2g35660 CTF2A C.G. S.X.
0.02 2e-2 42 Os05g0545400 AK105946.1 - Protein kinase domain containing protein 2e-4 At1g07150 MAPKKK13 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 3e+0 34 Arabidopsis thaliana At3g13882 3768810 structural constituent of ribosome F:structural constituent of ribosome;P:translation;C:ribosome, intracellular;BOFPM - - - C.G. S.X.
0.02 3e-1 38 Glycine max PsAffx.C99000009_at PsAffx.C99000009 - - 7e-1 At1g14120 2-oxoglutarate-dependent dioxygenase, putative C.G. S.X.
0.40 2e-70 266 Hordeum vulgare Contig8490_at Contig8490 - - 3e+0 At4g09030 AGP10 (ARABINOGALACTAN PROTEIN 10) C.G. S.X.
0.02 4e+0 34 Populus trichocarpa PtpAffx.207729.1.S1_at pmrna15362 hypothetical protein - 3e+0 At3g22275 unknown protein C.G. S.X.
0.39 6e-57 222 Triticum aestivum Ta.16981.1.S1_at CA616360 - - 3e+0 At1g77650 F-box family protein C.G. S.X.
0.02 9e-1 34 Vitis vinifera 1614509_at CF205971.1 - - 5e-3 At5g27200 ACP5 (acyl carrier protein 5) C.G. S.X.
0.02 3e-1 36 Zea mays Zm.11822.1.A1_at BM381027 hypothetical protein LOC100217292 - 2e+1 At5g62030 diphthamide synthesis DPH2 family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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