CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os03g0145000

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.44 58.1 Os03g0145000 9631.m00434 - Protein kinase domain containing protein 1e-4 At4g28650 leucine-rich repeat transmembrane protein kinase, putative S.X. H.G.
0.67 87.2 Os03g0156300 9631.m00529 - Alpha-expansin OsEXPA20 2e+0 At2g40610 ATEXPA8 (ARABIDOPSIS THALIANA EXPANSIN A8) S.X. H.G.
0.67 87.2 Os07g0531000 9635.m03425 - - 8e-3 At2g34060 peroxidase, putative S.X. H.G.
0.46 60.9 Os06g0112700 9634.m00125 - Myb, DNA-binding domain containing protein 2e-9 At4g22680 MYB85 (myb domain protein 85) S.X. H.G.
0.38 46.9 Os01g0634500 NM_192960.1 - - 1e-12 At2g38080 IRX12 (IRREGULAR XYLEM 12) S.X. H.G.
0.31 34.5 Os05g0433500 9633.m03337 - - 4e-1 At1g02840 SR1 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
65.4 99.9 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
35.1 99.8 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
33.3 99.8 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.8 99.6 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.1 99.3 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.7 99.1 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.8 98.9 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.3 98.9 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.6 98.8 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.6 98.8 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.35 9e-50 200 Os02g0111800 AK111191.1 - Protein kinase domain containing protein 7e-3 At1g08590 CLAVATA1 receptor kinase (CLV1) C.G. S.X.
0.07 2e-23 113 Os01g0247500 AK065614.1 - Protein kinase domain containing protein 8e-4 At1g49730 protein kinase family protein C.G. S.X.
0.07 9e-13 77 Os02g0194400 AK110011.1 - Protein kinase domain containing protein 1e-2 At1g78980 SRF5 (STRUBBELIG-RECEPTOR FAMILY 5) C.G. S.X.
0.06 4e-18 95 Os11g0232100 AK105669.1 - Protein kinase domain containing protein 7e-3 At1g72180 leucine-rich repeat transmembrane protein kinase, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 1e-4 50 Arabidopsis thaliana At4g28650 828983 leucine-rich repeat transmembrane protein kinase, putative F:protein binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVA - - - C.G. S.X.
0.02 4e-8 61 Glycine max PsAffx.C56000033_at PsAffx.C56000033 - - 5e-4 At5g61350 protein kinase family protein C.G. S.X.
0.08 2e-10 67 Hordeum vulgare Contig19894_at Contig19894 - - 9e-1 At2g35640 hydroxyproline-rich glycoprotein family protein C.G. S.X.
0.02 4e-2 42 Populus trichocarpa PtpAffx.212151.1.S1_at pmrna23828 hypothetical protein - 8e-21 At1g08590 CLAVATA1 receptor kinase (CLV1) C.G. S.X.
0.14 7e-80 299 Triticum aestivum TaAffx.113604.1.S1_at CA608738 - - 3e-1 At1g65490 unknown protein C.G. S.X.
0.04 7e-3 42 Vitis vinifera 1616189_at CF511570 hypothetical protein LOC100260741 - 6e-18 At1g75820 CLV1 (CLAVATA 1) C.G. S.X.
0.08 3e-15 83 Zea mays Zm.1140.1.S1_at BM073428 hypothetical protein LOC100279272 - 4e-14 At3g49670 BAM2 (BARELY ANY MERISTEM 2) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006468 The process of introducing a phosphate group on to a protein.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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