CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os03g0135100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.77 93.1 Os03g0135100 AK059955.1 - Glutathione S-transferase GSTF15 5e-1 At1g02540 unknown protein S.X. H.G.
0.80 94.6 Os10g0543800 AB103350.1 - Glutathione S-transferase 6e-1 At5g25940 early nodulin-related S.X. H.G.
0.77 93.1 Os03g0135200 AK059226.1 - Glutathione S-transferase GST 9 (EC 2.5.1.18) 2e+0 At4g10090 unknown protein S.X. H.G.
0.73 91.1 Os10g0159700 BI804873 - Heat shock protein Hsp20 domain containing protein 1e+0 At5g23660 MTN3 (Arabidopsis homolog of Medicago truncatula MTN3) S.X. H.G.
0.73 91.1 Os10g0159600 AK064267.1 - Heat shock protein Hsp20 domain containing protein 3e+0 At2g03680 SPR1 (SPIRAL1) S.X. H.G.
0.67 87.2 Os03g0134900 AK102889.1 - Glutathione S-transferase GSTF14 (Fragment) 3e+0 At3g62030 peptidyl-prolyl cis-trans isomerase, chloroplast / cyclophilin / rotamase / cyclosporin A-binding protein (ROC4) S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
13.3 98.4 GSM67058 IR29 control replicate 1 GSE3053 Rice salt expression
12.3 98.3 GSM99881 TCHW P23_ir29 salt stress, biological rep2 GSE4438 Expression data from rice under salinity stress
11.5 98.2 GSM99879 TCHW P21_ir29 control, biological rep3 GSE4438 Expression data from rice under salinity stress
10.9 98.1 GSM99875 TCHW P18_agami salt stress, biological rep3 GSE4438 Expression data from rice under salinity stress
10.6 98.1 GSM99880 TCHW P22_ir29 salt stress, biological rep1 GSE4438 Expression data from rice under salinity stress
10.5 98.1 GSM99878 TCHW P20_ir29 control, biological rep2 GSE4438 Expression data from rice under salinity stress
10.1 98.0 GSM99882 TCHW P24_ir29 salt stress, biological rep3 GSE4438 Expression data from rice under salinity stress
9.7 98.0 GSM67055 FL478 salt stressed replicate 1 GSE3053 Rice salt expression
9.5 97.9 GSM99877 TCHW P19_ir29 control, biological rep1 GSE4438 Expression data from rice under salinity stress
9.2 97.9 GSM99864 TCHW P7_ir29 control, biological rep1 GSE4438 Expression data from rice under salinity stress
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.27 2e-8 61 Os03g0135200 AK059226.1 - Glutathione S-transferase GST 9 (EC 2.5.1.18) 2e+0 At4g10090 unknown protein C.G. S.X.
0.12 3e-16 87 Os10g0543800 AB103350.1 - Glutathione S-transferase 6e-1 At5g25940 early nodulin-related C.G. S.X.
0.10 2e-11 71 Os03g0134900 AK102889.1 - Glutathione S-transferase GSTF14 (Fragment) 3e+0 At3g62030 peptidyl-prolyl cis-trans isomerase, chloroplast / cyclophilin / rotamase / cyclosporin A-binding protein (ROC4) C.G. S.X.
0.01 6e-2 40 Os11g0151700 AK073222.1 - Purple acid phosphatase 2e-5 At3g52820 PAP22 (PURPLE ACID PHOSPHATASE 22) C.G. S.X.
0.01 3e-1 38 Os01g0118400 CB646265 - HGA6 3e-4 At3g18170 transferase, transferring glycosyl groups C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 5e-1 36 Arabidopsis thaliana At1g02540 839516 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFVBPA - - - C.G. S.X.
0.02 4e-2 40 Glycine max GmaAffx.1203.1.A1_at BU548965 - - 1e+0 At3g05150 sugar transporter family protein C.G. S.X.
0.59 0 682 Hordeum vulgare Contig9946_at Contig9946 - - 8e+0 At5g12840 NF-YA1 (NUCLEAR FACTOR Y, SUBUNIT A1) C.G. S.X.
0.03 7e-1 36 Populus trichocarpa PtpAffx.215967.1.S1_s_at pmrna30457 hypothetical protein - 3e-3 At3g25520 ATL5 (A. THALIANA RIBOSOMAL PROTEIN L5) C.G. S.X.
0.52 6e-164 577 Triticum aestivum Ta.3628.2.S1_x_at CA645835 - - 2e+0 At1g73510 unknown protein C.G. S.X.
0.04 9e+0 30 Vitis vinifera 1617938_at CD720319 - - 5e+0 At3g23727 SCRL12 (SCR-Like 12) C.G. S.X.
0.57 0 652 Zea mays Zm.543.1.S1_at AF244678.1 glutathione transferase13 - 2e+0 At1g72210 basic helix-loop-helix (bHLH) family protein (bHLH096) C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage