CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os03g0121300

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.55 73.7 Os03g0121300 AK064633.1 - Peroxidase 1 9e-3 At5g14130 peroxidase, putative S.X. H.G.
0.82 95.0 Os07g0524900 AK071512.1 - Protein of unknown function DUF6 domain containingprotein 3e+0 At4g16240 unknown protein S.X. H.G.
0.71 89.6 Os10g0459700 AK110328.1 - Xyloglucan galactosyltransferase 7e-2 At4g13990 exostosin family protein S.X. H.G.
0.70 88.4 Os04g0494600 AK110895.1 - Protein of unknown function DUF642 family protein 5e-2 At3g17410 serine/threonine protein kinase, putative S.X. H.G.
0.64 83.4 Os06g0652600 AK101495.1 - Lustrin A 2e-1 At2g40970 myb family transcription factor S.X. H.G.
0.50 68.0 Os04g0467000 AK073154.1 - Conserved hypothetical protein 2e+0 At4g30850 HHP2 (HEPTAHELICAL TRANSMEMBRANE PROTEIN2) S.X. H.G.
0.47 62.3 Os02g0183000 9630.m00818 - Zinc-binding protein 2e-5 At2g12646 - S.X. H.G.
0.41 52.4 Os02g0454500 AK064156.1 - Membrane bound O-acyl transferase, MBOAT familyprotein 5e-5 At5g55360 long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family protein S.X. H.G.
0.39 48.3 Os06g0660200 AK101191.1 - Auxin efflux carrier component 2 (AtPIN2) (Auxinefflux carrier AGR) (Polar-auxin-transport effluxcomponent AGRAVITROPIC 1) (AtAGR1) (Ethylene insensitiveroot 1) (AtEIR1) (WAVY6) 1e-15 At1g70940 PIN3 (PIN-FORMED 3) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
50.7 99.9 GSM275415 Azucena root tip_Before the wax layer_Rep2 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
45.5 99.9 GSM275413 Azucena root tip_Buckled at the wax layer_rep3 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
40.9 99.9 GSM275416 Azucena root tip_Before the wax layer_Rep3 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
34.6 99.8 GSM275407 Azucena root tip_At the wax layer_rep3 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
31.2 99.7 GSM275412 Azucena root tip Buckled at the wax layer_rep2 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
24.7 99.4 GSM275408 Bala root tip_At the wax layer_rep1 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
24.4 99.4 GSM275414 Azucena root tip_Before the wax layer_rep1 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
22.0 99.3 GSM275410 Bala root tip_At the wax layer_rep3 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
20.3 99.1 GSM275409 Bala root tip_At the wax layer_rep2 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
19.1 99.0 GSM275406 Azucena root tip_At the wax layer_rep2 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.16 8e-11 69 Os03g0121200 AK120013.1 - Peroxidase 1 3e-4 At1g14540 anionic peroxidase, putative C.G. S.X.
0.14 5e-9 63 Os10g0536700 AK105708.1 - Plant peroxidase family protein 1e-2 At5g67400 peroxidase 73 (PER73) (P73) (PRXR11) C.G. S.X.
0.09 5e-9 63 Os05g0499300 D14997.1 - Peroxidase precursor (EC 1.11.1.7) 7e-1 At3g21770 peroxidase 30 (PER30) (P30) (PRXR9) C.G. S.X.
0.06 8e-8 59 Os05g0135400 AK063587.1 - Plant peroxidase family protein 4e-1 At5g66390 peroxidase 72 (PER72) (P72) (PRXR8) C.G. S.X.
0.05 9e-14 79 Os06g0695200 9634.m04682 - Peroxidase precursor (EC 1.11.1.7) 3e-2 At5g58390 peroxidase, putative C.G. S.X.
0.03 1e-9 65 Os07g0677600 AK060984.1 - Cationic peroxidase 1e-2 At5g39580 peroxidase, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 9e-3 42 Arabidopsis thaliana At5g14130 831263 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOB - - - C.G. S.X.
0.04 1e-2 42 Glycine max Gma.17816.2.S1_s_at BE020641 - - 2e-10 At1g68850 peroxidase, putative C.G. S.X.
0.19 8e-8 57 Hordeum vulgare Contig9877_at Contig9877 - - 5e-2 At1g44970 peroxidase, putative C.G. S.X.
0.03 8e-1 36 Populus trichocarpa PtpAffx.210546.1.S1_at pmrna20685 hypothetical protein - 5e-4 At1g24110 peroxidase, putative C.G. S.X.
0.12 3e-18 93 Triticum aestivum TaAffx.8730.1.S1_at CA620984 - - 1e-6 At3g21770 peroxidase 30 (PER30) (P30) (PRXR9) C.G. S.X.
0.03 2e-1 36 Vitis vinifera 1610628_at CF213924 hypothetical protein LOC100267732 - 2e-5 At5g42180 peroxidase 64 (PER64) (P64) (PRXR4) C.G. S.X.
0.05 1e-6 54 Zea mays Zm.4541.1.S1_at AY104176.1 hypothetical protein LOC100274427 - 5e-8 At5g67400 peroxidase 73 (PER73) (P73) (PRXR11) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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