Gene omics information

Query gene ID Os03g0120900
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6787.2Os03g0120900AK106367.1-AP2 domain containing protein RAP2.8 (Fragment)4e-18At4g01500NGA4 (NGATHA4)S.X.H.G.
0.8696.4Os01g0909400AK068178.1-Plant protein of unknown function DUF868 familyprotein1e-5At1g06160ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59)S.X.H.G.
0.7591.9Os03g0108500AK108704.1-Sterol desaturase family protein2e-4At4g22756SMO1-2 (STEROL C4-METHYL OXIDASE 1-2)S.X.H.G.
0.6987.9Os05g0516100AK107721.1-Conserved hypothetical protein3e-1At5g44570unknown proteinS.X.H.G.
0.6787.2Os02g0133900AK107180.1-Eukaryotic protein of unknown function DUF829family protein7e-1At4g24240WRKY7S.X.H.G.
0.6382.7Os04g0557800AB021079.1-Ra5e+0At5g41315GL3 (GLABROUS 3)S.X.H.G.
0.5877.0Os11g0285000AK070534.1-Beta-amyrin synthase3e-17At2g07050CAS1 (cycloartenol synthase 1)S.X.H.G.
0.5877.0Os04g01823009632.m00908-Peptidase S8 and S53, subtilisin, kexin, sedolisindomain containing protein5e+0At1g01900SBTI1.1S.X.H.G.
0.5877.0Os02g0103100AK071040.1-Conserved hypothetical protein3e-1At5g62500ATEB1B (END BINDING PROTEIN 1B)S.X.H.G.
0.5777.0Os03g02594009631.m01481-Leucoanthocyanidin reductase (EC 1.17.1.3)(Leucocyanidin reductase)5e-1At4g24700unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
68.199.9GSM195220stigma 3, biological rep 2GSE7951Genome-wide gene expression profiling of rice stigma
56.899.9GSM195218stigma 1, biological rep1GSE7951Genome-wide gene expression profiling of rice stigma
55.099.9GSM195219stigma 2, biological rep 2GSE7951Genome-wide gene expression profiling of rice stigma
13.998.5GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.698.5GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.798.4GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.498.2GSM159173Rice coleoptiles, 4 days old, aerobic, replicate N.2 (sample#10)GSE6908Transcript Profiling of the Aerobic and Anoxic Rice Coleoptile
11.398.2GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.298.2GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.097.8GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.266e-59230Os10g05371009638.m03537--3e-11At2g36080DNA-binding protein, putativeC.G.S.X.
0.191e-50202Os12g0157000AK110593.1-Hypothetical protein1e-5At2g36080DNA-binding protein, putativeC.G.S.X.
0.179e-135482Os02g0683500AK109908.1-DNA-binding protein RAV13e-16At4g01500NGA4 (NGATHA4)C.G.S.X.
0.121e-29133Os05g0549800CB672626-Pathogenesis-related transcriptional factor andERF domain containing protein9e-3At2g36080DNA-binding protein, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.104e-1893Arabidopsis thalianaAt4g01500826750NGA4 (NGATHA4)F:transcription factor activity;P:flower development, leaf development;C:cellular_component unknown;PF---C.G.S.X.
0.111e-1275Glycine maxGmaAffx.16227.1.S1_atAW133007RAV-like DNA-binding protein-7e-27At1g25560TEM1 (TEMPRANILLO 1)C.G.S.X.
0.126e-25115Hordeum vulgareContig19699_atContig19699--3e-8At1g25560TEM1 (TEMPRANILLO 1)C.G.S.X.
0.121e-346Populus trichocarpaPtpAffx.210115.1.S1_atpmrna19932--5e-17At2g46870NGA1 (NGATHA1)C.G.S.X.
0.102e-20101Triticum aestivumTaAffx.35357.1.S1_atBQ609009--7e-5At2g36080DNA-binding protein, putativeC.G.S.X.
0.051e-1583Vitis vinifera1618998_atCF204007.1--5e-16At4g01500NGA4 (NGATHA4)C.G.S.X.
0.103e-29129Zea maysZm.12114.1.S1_atBM379167DNA-binding protein RAV1-1e-11At1g25560TEM1 (TEMPRANILLO 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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