CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os03g0118100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.50 68.0 Os03g0118100 AK072029.1 - Conserved hypothetical protein 2e-1 At4g15460 glycine-rich protein S.X. H.G.
0.44 58.1 Os09g0433500 9637.m02294 - Glycosyl transferase, family 31 protein 5e-1 At3g29300 unknown protein S.X. H.G.
0.15 10.3 Os10g0476500 AK110990.1 - Conserved hypothetical protein 1e-2 At1g62240 unknown protein S.X. H.G.
0.10 5.7 Os04g0551500 AK068749.1 - SBP domain containing protein 3e-3 At3g06410 nucleic acid binding / zinc ion binding S.X. H.G.
0.07 3.7 Os04g0456600 9632.m03621 - - 1e+0 At5g04386 unknown protein S.X. H.G.
0.02 1.0 Os03g0558300 NM_184682.1 - - 3e+0 At1g64640 plastocyanin-like domain-containing protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
37.1 99.8 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
30.6 99.7 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
29.1 99.7 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.7 99.6 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.5 99.6 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.4 99.5 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.2 99.4 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.9 99.3 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.0 99.3 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.7 99.2 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.38 2e-93 343 Os02g0317900 9630.m02041 - - 3e-1 At2g47950 unknown protein C.G. S.X.
0.03 2e-6 56 Os10g0524000 AK106233.1 - Conserved hypothetical protein 5e-2 At5g44450 methyltransferase C.G. S.X.
0.02 3e-5 52 Os03g0692700 AK059787.1 - Protein of unknown function DUF538 family protein 7e+0 At4g13870 WRNEXO (WERNER SYNDROME-LIKE EXONUCLEASE) C.G. S.X.
0.02 1e-1 38 Os10g0171500 AK058441.1 - E-class P450, group I family protein 8e-1 At4g16240 unknown protein C.G. S.X.
0.01 2e-3 46 Os02g0116400 AK072347.1 - Oligopeptide transporter OPT superfamily protein 6e-3 At4g28990 RNA-binding protein-related C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e-1 38 Arabidopsis thaliana At4g15460 827217 glycine-rich protein F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;BMOPFVA - - - C.G. S.X.
0.02 8e-2 40 Glycine max GmaAffx.81540.1.S1_at CD399728 - - 3e-1 At3g24590 PLSP1 (plastidic type I signal peptidase 1) C.G. S.X.
0.03 1e-1 38 Hordeum vulgare Contig14299_at Contig14299 - - 9e-1 At4g15955 epoxide hydrolase-related C.G. S.X.
0.02 1e+0 36 Populus trichocarpa PtpAffx.221725.1.S1_at pmrna38758 hypothetical protein - 1e-10 At3g06250 FRS7 (FAR1-related sequence 7) C.G. S.X.
0.03 2e-1 38 Triticum aestivum TaAffx.31690.1.S1_at CA609915 - - 2e-1 At3g18210 oxidoreductase, 2OG-Fe(II) oxygenase family protein C.G. S.X.
0.01 4e+0 32 Vitis vinifera 1614117_at CF200679.1 - - 4e-4 At1g61890 MATE efflux family protein C.G. S.X.
0.02 4e-1 36 Zea mays ZmAffx.461.1.S1_at AI677289 - - 8e-1 At3g23290 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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