Gene omics information

Query gene ID Os03g0113800
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5269.6Os03g0113800AK065925.1-ARM repeat fold domain containing protein6e-11At5g41950bindingS.X.H.G.
0.7591.9Os09g0541900AB031299.1-Proteasome component region PCI domain containingprotein1e-24At1g20200EMB2719 (EMBRYO DEFECTIVE 2719)S.X.H.G.
0.6181.2Os05g0301500AK067027.1-Ribophorin I (Fragment)7e-5At1g76400ribophorin I family proteinS.X.H.G.
0.5573.7Os07g0209000AK058399.1-Dolichyl-di-phosphooligosaccharide-proteinglycotransferase (Oligosaccharyltransferase)-like1e-24At5g66680DGL1S.X.H.G.
0.5573.7Os05g0147400AK062146.1-T-complex protein 1, zeta subunit (TCP-1-zeta)(CCT-zeta) (CCT-zeta- 1)6e-67At5g16070chaperonin, putativeS.X.H.G.
0.4051.1Os06g0538000AK069949.1-Chaperonin Cpn60/TCP-1 family protein5e-83At5g26360chaperonin, putativeS.X.H.G.
0.3745.0Os01g0911200AK101333.1-Ribophorin II family protein1e-6At4g21150HAP6 (HAPLESS 6)S.X.H.G.
0.3338.8Os06g0143900AK111584.1-Coatomer protein complex, beta prime6e-99At1g52360coatomer protein complex, subunit beta 2 (beta prime), putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.897.0GSM275410Bala root tip_At the wax layer_rep3GSE10857Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
4.796.4GSM429982Rice wild-type panicle rep1GSE17194Genome-wide gene expression profiling of rice Indica cultivar Zhongxian 3037 and mutant phoenix (pho) panicle
4.696.3GSM67058IR29 control replicate 1GSE3053Rice salt expression
4.596.3GSM429983Rice mutant phoenix (pho) panicle rep1GSE17194Genome-wide gene expression profiling of rice Indica cultivar Zhongxian 3037 and mutant phoenix (pho) panicle
4.496.2GSM67054FL478 control replicate 3GSE3053Rice salt expression
4.196.0GSM409421Nipponbare_young panicle 2cm, biological rep1GSE16265SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
4.196.0GSM275409Bala root tip_At the wax layer_rep2GSE10857Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
4.095.9GSM275416Azucena root tip_Before the wax layer_Rep3GSE10857Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
3.995.8GSM67062IR29 salt stressed replicate 3GSE3053Rice salt expression
3.995.8GSM99864TCHW P7_ir29 control, biological rep1GSE4438Expression data from rice under salinity stress
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.425e-158559Os10g0518300AK099732.1-TPR-like domain containing protein2e-5At5g41950bindingC.G.S.X.
0.017e-344Os10g0442700AK066106.1--5e-4At5g03320protein kinase, putativeC.G.S.X.
0.017e-344Os11g0538900AK072950.1-Citrate synthase (EC 4.1.3.7)4e-40At2g44350ATCSC.G.S.X.
0.015e-138Os08g04684009636.m03666-Conserved hypothetical protein1e+0At3g55460SCL30C.G.S.X.
0.015e-138Os10g0494000AK106067.1-Protein of unknown function DUF789 family protein8e-7At1g03610unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.156e-1169Arabidopsis thalianaAt5g41950834200bindingF:binding;P:biological_process unknown;C:cellular_component unknown;OMBFPAV---C.G.S.X.
0.094e-1997Glycine maxGma.7636.1.S1_atAW351204--1e-20At5g41950bindingC.G.S.X.
0.500878Hordeum vulgareContig6886_atContig6886--9e-7At5g41950bindingC.G.S.X.
0.203e-20101Populus trichocarpaPtpAffx.7088.1.S1_a_atCF233424hypothetical protein-1e-49At5g41950bindingC.G.S.X.
0.213e-56220Triticum aestivumTa.8150.3.S1_a_atCA641945--1e-3At5g41950bindingC.G.S.X.
0.251e-1893Vitis vinifera1613126_atCF214395hypothetical protein LOC100232876-5e-35At5g41950bindingC.G.S.X.
0.163e-60232Zea maysZm.8126.1.A1_atCK348022--2e-3At5g41950bindingC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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