CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0831600

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.51 68.7 Os02g0831600 AB081951.1 - AGO1 homologous protein 2e-21 At1g48410 AGO1 (ARGONAUTE 1) S.X. H.G.
0.62 81.5 Os03g0287700 AK058301.1 - Hypothetical protein 2e+0 At2g39820 eukaryotic translation initiation factor 6, putative / eIF-6, putative S.X. H.G.
0.52 69.6 Os03g0109400 AK110678.1 - Homeobox domain containing protein 3e-14 At1g52150 ATHB-15 S.X. H.G.
0.50 68.0 Os03g0143800 BQ908516 - Cytoplasmic fragile X mental retardation proteininteracting protein family protein 6e+0 At5g46010 homeobox-leucine zipper transcription factor family protein S.X. H.G.
0.47 62.3 Os07g0568000 AK072783.1 - Conserved hypothetical protein 2e-2 At1g10180 unknown protein S.X. H.G.
0.43 55.4 Os02g0200800 AB118005.1 - Targeting for Xklp2 family protein 6e-8 At4g32330 - S.X. H.G.
0.42 53.9 Os03g0773700 AK102670.1 - Receptor-like protein kinase 2 8e-9 At3g49670 BAM2 (BARELY ANY MERISTEM 2) S.X. H.G.
0.41 52.4 Os07g0259700 AK067947.1 - PRLI-interacting factor G (Fragment) 1e+0 At1g53625 unknown protein S.X. H.G.
0.40 51.1 Os02g0705300 AK101936.1 - Tubby-like protein 2 1e-7 At1g25280 AtTLP10 (TUBBY LIKE PROTEIN 10) S.X. H.G.
0.39 48.3 Os02g0767000 AK122109.1 - Remorin, C-terminal region domain containingprotein 1e-9 At4g36970 remorin family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
13.3 98.4 GSM195228 Embryo GSE7951 Genome-wide gene expression profiling of rice stigma
13.0 98.4 GSM429983 Rice mutant phoenix (pho) panicle rep1 GSE17194 Genome-wide gene expression profiling of rice Indica cultivar Zhongxian 3037 and mutant phoenix (pho) panicle
10.5 98.1 GSM159187 SAM, biological rep 2 GSE6893 Expression data for reproductive development in rice
8.6 97.8 GSM302914 emb6D_rep1 GSE11966 Expression data from rice embryo,endosperm,root,leaf and seedling
8.6 97.8 GSM409431 9311_young panicle 2cm, biological rep2 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
7.9 97.6 GSM159186 SAM, biological rep 1 GSE6893 Expression data for reproductive development in rice
7.7 97.6 GSM409430 9311_young panicle 2cm, biological rep1 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
7.0 97.4 GSM195224 Suspension cell GSE7951 Genome-wide gene expression profiling of rice stigma
7.0 97.4 GSM429982 Rice wild-type panicle rep1 GSE17194 Genome-wide gene expression profiling of rice Indica cultivar Zhongxian 3037 and mutant phoenix (pho) panicle
6.6 97.3 GSM409427 Nipponbare_young panicle 2cm, biological rep3 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.56 0 1037 Os06g0729300 AK122176.1 - AGO1 homologous protein 2e-21 At1g48410 AGO1 (ARGONAUTE 1) C.G. S.X.
0.25 1e-52 210 Os04g0566500 AK102911.1 - Argonaute and Dicer protein, PAZ domain containingprotein 2e-52 At1g48410 AGO1 (ARGONAUTE 1) C.G. S.X.
0.20 2e-41 173 Os02g0672200 AK111553.1 - Argonaute and Dicer protein, PAZ domain containingprotein 2e-52 At1g48410 AGO1 (ARGONAUTE 1) C.G. S.X.
0.16 3e-31 139 Os06g0597400 AB081950.1 - - 4e-20 At5g43810 ZLL (ZWILLE) C.G. S.X.
0.05 9e-10 67 Os03g0800200 D42427 - Argonaute protein 3e-11 At2g27880 AGO5 (ARGONAUTE 5) C.G. S.X.
0.04 1e-8 63 Os03g0682200 9631.m04654 - Argonaute protein 3e-2 At5g43810 ZLL (ZWILLE) C.G. S.X.
0.04 1e-8 63 Os03g0789500 AK059333.1 - Hypothetical protein 6e-1 At4g10740 F-box family protein C.G. S.X.
0.01 2e-7 59 Os07g0471300 AK069685.1 - Argonaute 4 protein 5e+0 At5g43810 ZLL (ZWILLE) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.17 2e-21 105 Arabidopsis thaliana At1g48410 841262 AGO1 (ARGONAUTE 1) Encodes an RNA Slicer that selectively recruits microRNAs and siRNAs. There is currently no evidence that AGO1 Slicer is in a high molecular weight RNA-induced silencing complex (RISC). Mutants are defective in post-transcriptional gene silencing and have pleiotropic developmental and morphological defects. Through its action on the regulation of ARF17 expression, the protein regulates genes involved at the cross talk between auxin and light signaling during adventitious root development. AGO1 seems to be targeted for degradation by silencing suppressor F-box-containing proteins from Turnip yellow virus and Cucurbit aphid-borne yellow virus. - - - C.G. S.X.
0.19 3e-24 115 Glycine max Gma.5747.1.S1_at BG510757 - - 4e-40 At1g48410 AGO1 (ARGONAUTE 1) C.G. S.X.
0.24 8e-35 149 Hordeum vulgare Contig6398_at Contig6398 - - 2e-66 At1g48410 AGO1 (ARGONAUTE 1) C.G. S.X.
0.33 4e-42 174 Populus trichocarpa Ptp.797.1.S1_at BU886963 argonaute protein group - 2e-52 At1g48410 AGO1 (ARGONAUTE 1) C.G. S.X.
0.43 0 940 Triticum aestivum Ta.9349.1.S1_at BQ803617 - - 2e-7 At1g48410 AGO1 (ARGONAUTE 1) C.G. S.X.
0.05 6e-13 75 Vitis vinifera 1611391_at CF513307 hypothetical protein LOC100256320 - 1e-15 At1g48410 AGO1 (ARGONAUTE 1) C.G. S.X.
0.24 8e-50 198 Zea mays Zm.6863.2.A1_a_at CF637783 hypothetical protein LOC100193970 - 7e-67 At1g48410 AGO1 (ARGONAUTE 1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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