CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0822900

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.2 Os02g0822900 9630.m05753 - Protein kinase domain containing protein 3e-1 At5g55750 hydroxyproline-rich glycoprotein family protein S.X. H.G.
0.80 94.6 Os01g0568000 9629.m03678 - - 5e-1 At5g26890 unknown protein S.X. H.G.
0.75 91.9 Os05g0581600 AK110257.1 - Conserved hypothetical protein 2e+0 At5g47080 CKB1 S.X. H.G.
0.71 89.6 Os04g0194900 9632.m01060 - - 5e+0 At5g33390 glycine-rich protein S.X. H.G.
0.63 82.7 Os07g0135700 9635.m00360 - - 1e+1 At5g65274 - S.X. H.G.
0.50 68.0 Os04g0395100 AK063396.1 - Protein of unknown function DUF26 domaincontaining protein 7e-1 At4g19030 NLM1 S.X. H.G.
0.47 62.3 Os10g0330580 NM_195757.1 - - 2e+0 At1g30475 - S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
80.5 99.9 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
31.1 99.7 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.7 99.5 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.6 99.5 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.2 99.5 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.5 99.4 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.4 99.4 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.2 99.3 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.9 99.3 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.7 99.2 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 2e-10 69 Os02g0665500 9630.m04316 - - 1e-7 At2g45910 protein kinase family protein / U-box domain-containing protein C.G. S.X.
0.03 2e-10 69 Os02g0665400 AK073914.1 - Conserved hypothetical protein 4e-1 At1g04445 zinc finger (C2H2 type) family protein C.G. S.X.
0.02 5e-5 52 Os04g0417400 9632.m03266 - U box domain containing protein 7e-1 At4g01040 glycosyl hydrolase family 18 protein C.G. S.X.
0.01 1e-2 44 Os01g0752100 NM_191251.1 - Cyclin-like F-box domain containing protein 7e-1 At1g07950 surfeit locus protein 5 family protein / SURF5 family protein C.G. S.X.
0.01 1e-2 44 Os01g0865700 NM_190741.1 - U box domain containing protein 3e+0 At1g58684 40S ribosomal protein S2, putative C.G. S.X.
0.01 1e-2 44 Os02g0539200 AK108494.1 - U box domain containing protein 9e-4 At2g48120 PAC (PALE CRESS) C.G. S.X.
0.01 1e-2 44 Os04g0686000 AK108418.1 - U box domain containing protein 3e-3 At5g46780 VQ motif-containing protein C.G. S.X.
0.01 1e-2 44 Os09g0532900 AK106873.1 - Myb, DNA-binding domain containing protein 6e-32 At4g22680 MYB85 (myb domain protein 85) C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 3e-1 38 Arabidopsis thaliana At5g55750 835669 hydroxyproline-rich glycoprotein family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFBVA - - - C.G. S.X.
0.01 1e-1 40 Glycine max PsAffx.psZG001xD04f_at PsAffx.psZG001xD04f - - 3e+0 At5g50080 DNA binding / transcription factor C.G. S.X.
0.08 6e-29 129 Hordeum vulgare HO05O09S_at HO05O09S - - 1e+1 At5g61110 protein binding / zinc ion binding C.G. S.X.
0.01 5e-1 38 Populus trichocarpa PtpAffx.37336.1.A1_at CV255973 hypothetical protein - 8e-2 At1g50690 - C.G. S.X.
0.09 7e-18 93 Triticum aestivum TaAffx.86560.1.S1_at CA605673 - - 5e-2 At1g76020 - C.G. S.X.
0.01 4e-1 36 Vitis vinifera 1612996_at CD798919 - - 5e-2 At4g11600 ATGPX6 (GLUTATHIONE PEROXIDASE 6) C.G. S.X.
0.01 6e-1 36 Zea mays Zm.7847.1.A1_at BM080149 - - 1e+0 At3g27416 unknown protein C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage