CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0822400

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.33 38.8 Os02g0822400 AK062258.1 - No apical meristem (NAM) protein domain containingprotein 5e-3 At5g09330 anac082 (Arabidopsis NAC domain containing protein 82) S.X. H.G.
0.77 93.1 Os04g0517400 AK059571.1 - Conserved hypothetical protein 5e-15 At5g18480 PGSIP6 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 6) S.X. H.G.
0.67 87.2 Os02g0581300 AK071553.1 - ASC1 (Alternaria stem canker resistance protein) 5e-8 At3g25540 LAG1 S.X. H.G.
0.60 79.7 Os09g0281700 X59276.1 - Ras-related protein RGP1 (GTP-binding regulatoryprotein RGP1) 1e-17 At5g47960 ATRABA4C S.X. H.G.
0.55 73.7 Os10g0577800 AK121290.1 - Conserved hypothetical protein 3e-1 At4g34080 unknown protein S.X. H.G.
0.48 63.7 Os06g0714200 BM419528 - Calcium/calmodulin-dependent protein kinasehomolog|CaM kinase homolog|MCK1 protein 8e-19 At2g46700 calcium-dependent protein kinase, putative / CDPK, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.6 96.3 GSM357133 14-day-old seedling, rep 2 GSE14275 Expression data for heat shock in rice seedlings
3.7 95.6 GSM154946 Leaf_DMSO-treatment_30min_replicate 2 GSE6719 Cytokinin responsive genes in rice
3.6 95.5 GSM154956 Leaf_tZ-treatment_120min_replicate 3 GSE6719 Cytokinin responsive genes in rice
3.6 95.5 GSM154953 Leaf_DMSO-treatment_120min_replicate 3 GSE6719 Cytokinin responsive genes in rice
3.6 95.5 GSM154952 Leaf_DMSO-treatment_120min_replicate 2 GSE6719 Cytokinin responsive genes in rice
3.5 95.3 GSM154955 Leaf_tZ-treatment_120min_replicate 2 GSE6719 Cytokinin responsive genes in rice
3.5 95.3 GSM154951 Leaf_DMSO-treatment_120min_replicate 1 GSE6719 Cytokinin responsive genes in rice
3.4 95.2 GSM154948 Leaf_tZ-treatment_30min_replicate 1 GSE6719 Cytokinin responsive genes in rice
3.4 95.2 GSM154950 Leaf_tZ-treatment_30min_replicate 3 GSE6719 Cytokinin responsive genes in rice
3.2 94.9 GSM154949 Leaf_tZ-treatment_30min_replicate 2 GSE6719 Cytokinin responsive genes in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.12 2e-22 109 Os08g0562200 AK099629.1 - No apical meristem (NAM) protein domain containingprotein 2e-2 At5g04410 NAC2 C.G. S.X.
0.11 1e-14 83 Os06g0344900 9634.m02331 - No apical meristem (NAM) protein family protein 1e-3 At1g76420 CUC3 (CUP SHAPED COTYLEDON3) C.G. S.X.
0.06 1e-14 83 Os01g0884300 AK068392.1 - No apical meristem (NAM) protein domain containingprotein 7e-29 At1g01720 ATAF1 C.G. S.X.
0.06 1e-14 83 Os05g0421600 AK107746.1 - Conserved hypothetical protein 3e-18 At1g01720 ATAF1 C.G. S.X.
0.06 2e-10 69 Os06g0530400 AB028186.1 - No apical meristem (NAM) protein domain containingprotein 2e-10 At4g10350 ANAC070 (Arabidopsis NAC domain containing protein 70) C.G. S.X.
0.04 5e-14 81 Os01g0393100 AK107407.1 - No apical meristem (NAM) protein domain containingprotein 4e-24 At5g18270 ANAC087 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 5e-3 44 Arabidopsis thaliana At5g09330 830792 anac082 (Arabidopsis NAC domain containing protein 82) F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PMOBF - - - C.G. S.X.
0.03 5e-4 48 Glycine max GmaAffx.93509.1.S1_s_at CF808510 NAC domain protein - 2e-9 At1g52890 ANAC019 (Arabidopsis NAC domain containing protein 19) C.G. S.X.
0.36 5e-171 601 Hordeum vulgare Contig5241_at Contig5241 - - 8e-2 At5g08790 ATAF2 C.G. S.X.
0.02 1e-4 50 Populus trichocarpa PtpAffx.205898.1.S1_at pmrna11691 NAC domain protein, IPR003441 - 2e-4 At5g39610 ATNAC6 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 6) C.G. S.X.
0.12 1e-19 99 Triticum aestivum Ta.9136.1.S1_at CK200225 - - 3e-1 At1g76420 CUC3 (CUP SHAPED COTYLEDON3) C.G. S.X.
0.03 4e-1 36 Vitis vinifera 1609555_at CD719835 hypothetical protein LOC100261123 - 2e-30 At5g08790 ATAF2 C.G. S.X.
0.15 2e-12 73 Zea mays Zm.739.1.S1_at AY105808.1 NAC domain-containing protein 78 - 6e-2 At1g68330 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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