CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0817700

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.40 51.1 Os02g0817700 AY224469.1 - Acetyl-CoA acyltransferase (3-ketoacyl-coathiolase) (EC 2.3.1.16) 5e-9 At1g04710 PKT4 (PEROXISOMAL 3-KETOACYL-COA THIOLASE 4) S.X. H.G.
0.61 81.2 Os12g0623500 CB629004 - Cationic amino acid transporter-like protein 3e-17 At1g58030 CAT2 (CATIONIC AMINO ACID TRANSPORTER 2) S.X. H.G.
0.27 27.5 Os01g0796400 AK060287.1 - - 2e-11 At3g15290 3-hydroxybutyryl-CoA dehydrogenase, putative S.X. H.G.
0.25 24.1 Os05g0545000 AK066240.1 - Phosphatidylinositol transfer-like protein IV 5e-9 At2g18180 SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative S.X. H.G.
0.19 15.1 Os02g0821900 AK071088.1 - Conserved hypothetical protein 2e-1 At4g00355 unknown protein S.X. H.G.
0.14 9.3 Os06g0608800 AK099238.1 - Copine domain containing protein 3e-16 At3g01650 RGLG1 (RING domain Ligase1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
6.0 97.0 GSM159180 Mature leaf, biological rep 1 GSE6893 Expression data for reproductive development in rice
5.5 96.8 GSM154950 Leaf_tZ-treatment_30min_replicate 3 GSE6719 Cytokinin responsive genes in rice
5.4 96.8 GSM159185 Y Leaf, biological rep 3 GSE6893 Expression data for reproductive development in rice
5.1 96.6 GSM159182 Mature leaf, biological rep 3 GSE6893 Expression data for reproductive development in rice
4.8 96.5 GSM154948 Leaf_tZ-treatment_30min_replicate 1 GSE6719 Cytokinin responsive genes in rice
4.7 96.4 GSM154949 Leaf_tZ-treatment_30min_replicate 2 GSE6719 Cytokinin responsive genes in rice
4.5 96.3 GSM159181 Mature leaf, biological rep 2 GSE6893 Expression data for reproductive development in rice
4.4 96.2 GSM154956 Leaf_tZ-treatment_120min_replicate 3 GSE6719 Cytokinin responsive genes in rice
4.3 96.1 GSM154955 Leaf_tZ-treatment_120min_replicate 2 GSE6719 Cytokinin responsive genes in rice
4.1 96.0 GSM375647 Taichung 65_shoot_replicate 1 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.24 2e-22 109 Os10g0457600 AK072460.1 - Acetyl-CoA C-acyltransferase (3-ketoacyl-coathiolase b) (EC 2.3.1.16) (Fragment) 2e-20 At2g33150 PKT3 (PEROXISOMAL 3-KETOACYL-COA THIOLASE 3) C.G. S.X.
0.01 3e-2 42 Os02g0684200 9630.m05881 - Hypothetical protein 7e-1 At4g32970 unknown protein C.G. S.X.
0.01 3e-2 42 Os05g0212300 AK063458.1 - Endo-beta-1,4-glucanase precursor (EC 3.2.1.4) 7e-5 At1g64390 AtGH9C2 (Arabidopsis thaliana glycosyl hydrolase 9C2) C.G. S.X.
0.01 1e-1 40 Os02g0548100 9630.m03271 - - 4e-2 At1g67770 TEL2 (TERMINAL EAR1-LIKE 2) C.G. S.X.
0.01 1e-1 40 Os08g0472400 9636.m03699 - Conserved hypothetical protein 6e-1 At5g67020 unknown protein C.G. S.X.
0.01 1e-1 40 Os12g0609600 AK111050.1 - Hypothetical protein 3e+0 At1g50630 unknown protein C.G. S.X.
0.01 5e-1 38 Os01g0722300 NM_191815.1 - Typical P-type R2R3 Myb protein (Fragment) 3e-2 At3g27809 unknown protein C.G. S.X.
0.01 5e-1 38 Os04g0162500 AK108645.1 - The start codon is not identified. 9e-3 At2g28200 nucleic acid binding / transcription factor/ zinc ion binding C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.15 5e-9 63 Arabidopsis thaliana At1g04710 839434 PKT4 (PEROXISOMAL 3-KETOACYL-COA THIOLASE 4) EC2.3.1.16 thiolase. - - - C.G. S.X.
0.22 1e-10 69 Glycine max Gma.11164.1.S1_at AW350722 Peroxisomal 3-ketoacyl-CoA thiolase precursor - 1e-85 At1g04710 PKT4 (PEROXISOMAL 3-KETOACYL-COA THIOLASE 4) C.G. S.X.
0.57 0 983 Hordeum vulgare Contig2750_s_at Contig2750 - - 4e-15 At2g33150 PKT3 (PEROXISOMAL 3-KETOACYL-COA THIOLASE 3) C.G. S.X.
0.26 7e-18 93 Populus trichocarpa Ptp.6743.1.A1_s_at CV245002 hypothetical protein - 9e-9 At2g33150 PKT3 (PEROXISOMAL 3-KETOACYL-COA THIOLASE 3) C.G. S.X.
0.57 0 841 Triticum aestivum Ta.28367.1.S1_at BJ265147 - - 6e-8 At1g04710 PKT4 (PEROXISOMAL 3-KETOACYL-COA THIOLASE 4) C.G. S.X.
0.28 2e-36 153 Vitis vinifera 1615976_at CF517016 hypothetical protein LOC100247651 - 2e-113 At2g33150 PKT3 (PEROXISOMAL 3-KETOACYL-COA THIOLASE 3) C.G. S.X.
0.50 0 787 Zea mays Zm.2594.1.S1_at CK370794 Hypothetical protein LOC100192501 - 1e-12 At2g33150 PKT3 (PEROXISOMAL 3-KETOACYL-COA THIOLASE 3) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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