CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0787300

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os02g0787300 AK120525.1 - MAP kinase kinase 2e-1 At5g05230 ubiquitin-protein ligase S.X. H.G.
0.67 87.2 Os03g0148700 AK065978.1 - Protein kinase domain containing protein 9e-7 At1g10620 protein kinase family protein S.X. H.G.
0.60 79.7 Os03g0773300 AK100394.1 - Protein kinase domain containing protein 6e-3 At2g16250 leucine-rich repeat transmembrane protein kinase, putative S.X. H.G.
0.33 38.8 Os08g0497900 AK071174.1 - Conserved hypothetical protein 9e-1 At1g51510 Y14 S.X. H.G.
0.31 34.5 Os03g0224700 AY344490.1 - HSP protein (Fragment) 1e-5 At4g36990 HSF4 (HEAT SHOCK FACTOR 4) S.X. H.G.
0.16 11.3 Os08g0545000 AK121240.1 - Conserved hypothetical protein 2e-2 At4g33520 PAA1 (P-TYPE ATP-ASE 1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
37.1 99.8 GSM154945 Leaf_DMSO-treatment_30min_replicate 1 GSE6719 Cytokinin responsive genes in rice
35.3 99.8 GSM154947 Leaf_DMSO-treatment_30min_replicate 3 GSE6719 Cytokinin responsive genes in rice
34.7 99.8 GSM154946 Leaf_DMSO-treatment_30min_replicate 2 GSE6719 Cytokinin responsive genes in rice
31.1 99.7 GSM154951 Leaf_DMSO-treatment_120min_replicate 1 GSE6719 Cytokinin responsive genes in rice
30.6 99.7 GSM154953 Leaf_DMSO-treatment_120min_replicate 3 GSE6719 Cytokinin responsive genes in rice
29.1 99.7 GSM154952 Leaf_DMSO-treatment_120min_replicate 2 GSE6719 Cytokinin responsive genes in rice
12.0 98.3 GSM173080 Rice MH63 Control2 GSE7197 Down-regulation of OsSRT1 induces DNA fragmentation and cell death in rice
11.3 98.2 GSM173086 Rice MH63 Control1 GSE7197 Down-regulation of OsSRT1 induces DNA fragmentation and cell death in rice
9.4 97.9 GSM173089 Rice MH63 Control3 GSE7197 Down-regulation of OsSRT1 induces DNA fragmentation and cell death in rice
8.2 97.7 GSM154949 Leaf_tZ-treatment_30min_replicate 2 GSE6719 Cytokinin responsive genes in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.44 0 876 Os06g0191300 AK112016.1 - MAP kinase kinase 3e+0 At3g57500 unknown protein C.G. S.X.
0.02 1e-7 59 Os05g0480000 AK061052.1 - Cell division protein kinase 4 (EC 2.7.1.37)(Cyclin-dependent kinase 4) (PSK-J3) (CRK3) 1e-8 At5g01920 STN8 C.G. S.X.
0.02 8e-6 54 Os12g0632900 AK071957.1 - Receptor protein kinase 3e-5 At5g49660 leucine-rich repeat transmembrane protein kinase, putative C.G. S.X.
0.02 3e-5 52 Os04g0439600 AK109788.1 - Protein kinase domain containing protein 4e-4 At3g13065 SRF4 (STRUBBELIG-RECEPTOR FAMILY 4) C.G. S.X.
0.01 3e-5 52 Os03g0205000 AK069442.1 - Ubiquitin system component Cue domain containingprotein 1e-1 At1g27752 - C.G. S.X.
0.01 1e-4 50 Os01g0190400 AK064011.1 - Hexokinase 2e-1 At2g19860 HXK2 (HEXOKINASE 2) C.G. S.X.
0.01 1e-4 50 Os07g0260000 CB097056 - Protein prenyltransferase domain containingprotein 2e-5 At4g18840 pentatricopeptide (PPR) repeat-containing protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 2e-1 38 Arabidopsis thaliana At5g05230 830405 ubiquitin-protein ligase F:ubiquitin-protein ligase activity;P:protein ubiquitination;C:ubiquitin ligase complex;PMFBO - - - C.G. S.X.
0.19 4e-13 77 Glycine max Gma.11182.1.S1_a_at BQ742221 - - 8e-12 At1g51660 ATMKK4 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE KINASE 4) C.G. S.X.
0.20 3e-76 286 Hordeum vulgare Contig15489_at Contig15489 - - 1e+0 At2g35700 ERF38 (ERF FAMILY PROTEIN 38) C.G. S.X.
0.02 8e-2 40 Populus trichocarpa PtpAffx.221525.1.S1_at pmrna38453 hypothetical protein - 8e-18 At3g13850 LBD22 (LOB DOMAIN-CONTAINING PROTEIN 22) C.G. S.X.
0.02 7e-8 59 Triticum aestivum Ta.1981.2.A1_at BE213280 - - 6e-4 At5g01920 STN8 C.G. S.X.
0.16 1e-12 73 Vitis vinifera 1606638_at CF518649 hypothetical protein LOC100258699 - 3e-11 At1g51660 ATMKK4 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE KINASE 4) C.G. S.X.
0.02 3e-5 50 Zea mays Zm.4647.1.A1_at CO523612 - - 6e-3 At2g31370 bZIP transcription factor (POSF21) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006468 The process of introducing a phosphate group on to a protein.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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