CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0786900

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.61 81.2 Os02g0786900 AK105575.1 - PR-1a pathogenesis related protein (Hv-1a)precursor 8e-1 At2g04025 unknown protein S.X. H.G.
0.50 68.0 Os08g0112900 AK105876.1 - Lipolytic enzyme, G-D-S-L family protein 1e-2 At1g71691 GDSL-motif lipase/hydrolase family protein S.X. H.G.
0.39 48.3 Os01g0636500 CR278327 - Glycoside hydrolase, family 28 protein 6e-4 At1g10640 polygalacturonase S.X. H.G.
0.29 31.1 Os03g0283400 AK064670.1 - Conserved hypothetical protein 7e-1 At5g63300 structural constituent of ribosome S.X. H.G.
0.29 31.1 Os04g0525700 AK105830.1 - Peptidase S10, serine carboxypeptidase familyprotein 2e-1 At5g23210 SCPL34 S.X. H.G.
0.27 27.5 Os09g0487200 AK070460.1 - Conserved hypothetical protein 3e-8 At2g42320 nucleolar protein gar2-related S.X. H.G.
0.22 19.4 Os02g0666500 AK069029.1 - Cytochrome P450 1e-3 At5g58860 CYP86A1 (CYTOCHROME P450 86 A1) S.X. H.G.
0.20 16.5 Os06g0217900 AK103765.1 - Cyclin, C-terminal domain containing protein 8e-1 At4g14520 DNA-directed RNA polymerase II-related S.X. H.G.
0.16 11.3 Os03g0239000 AK061284.1 - Glycoside hydrolase, family 16 domain containingprotein 2e-4 At1g32170 XTR4 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 4) S.X. H.G.
0.15 10.3 Os01g0182700 AY341853.1 - WRKY transcription factor 34 1e-2 At2g44745 WRKY family transcription factor S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
24.4 99.4 GSM195230 5d-seed GSE7951 Genome-wide gene expression profiling of rice stigma
15.6 98.7 GSM99862 TCHW P5_m103 salt stress, biological rep2 GSE4438 Expression data from rice under salinity stress
15.2 98.7 GSM99873 TCHW P16_agami salt stress, biological rep1 GSE4438 Expression data from rice under salinity stress
14.6 98.6 GSM99863 TCHW P6_m103 salt stress, biological rep3 GSE4438 Expression data from rice under salinity stress
14.3 98.6 GSM99870 TCHW P13_agami control, biological rep1 GSE4438 Expression data from rice under salinity stress
14.2 98.5 GSM99871 TCHW P14_agami control, biological rep2 GSE4438 Expression data from rice under salinity stress
10.5 98.1 GSM99874 TCHW P17_agami salt stress, biological rep2 GSE4438 Expression data from rice under salinity stress
10.5 98.1 GSM429982 Rice wild-type panicle rep1 GSE17194 Genome-wide gene expression profiling of rice Indica cultivar Zhongxian 3037 and mutant phoenix (pho) panicle
9.1 97.9 GSM409421 Nipponbare_young panicle 2cm, biological rep1 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
8.7 97.8 GSM99875 TCHW P18_agami salt stress, biological rep3 GSE4438 Expression data from rice under salinity stress
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.09 2e-9 65 Os07g0127500 AK062949.1 - PR-1a pathogenesis related protein (Hv-1a)precursor 4e-1 At1g31175 unknown protein C.G. S.X.
0.08 7e-12 73 Os07g0129200 AF251277.1 - PR1a protein 1e-1 At4g33730 pathogenesis-related protein, putative C.G. S.X.
0.08 2e-9 65 Os07g0129300 AF306651.1 - Pathogenesis-related protein 1 precursor 1e-1 At1g50050 pathogenesis-related protein, putative C.G. S.X.
0.06 7e-9 63 Os01g0382400 AK121108.1 - Pathogenesis-related protein PRB1-2 precursor 1e-1 At3g09590 pathogenesis-related protein, putative C.G. S.X.
0.05 3e-14 81 Os07g0124900 AY339373.1 - PR1a protein 6e+0 At5g18210 short-chain dehydrogenase/reductase (SDR) family protein C.G. S.X.
0.05 4e-13 77 Os07g0125000 AK060005.1 - Pathogenesis-related protein PR-1 precursor 1e-4 At3g09590 pathogenesis-related protein, putative C.G. S.X.
0.05 4e-13 77 Os07g0127600 AK063248.1 - Allergen V5/Tpx-1 related family protein 1e-4 At3g09590 pathogenesis-related protein, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 8e-1 36 Arabidopsis thaliana At2g04025 814929 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P - - - C.G. S.X.
0.02 7e-2 40 Glycine max PsAffx.C262000006_at PsAffx.C262000006 - - 5e+0 At4g14455 ATBET12 C.G. S.X.
0.05 2e-3 44 Hordeum vulgare Contig12046_at Contig12046 - - 6e+0 At3g14060 unknown protein C.G. S.X.
0.03 2e-2 42 Populus trichocarpa PtpAffx.219633.1.S1_at pmrna35595 hypothetical protein - 5e+0 At1g44085 glycine-rich protein C.G. S.X.
0.10 3e-6 54 Triticum aestivum TaAffx.30321.1.S1_at CA626204 - - 5e-2 At4g33730 pathogenesis-related protein, putative C.G. S.X.
0.04 6e-2 38 Vitis vinifera 1618533_at CB970020 hypothetical protein LOC100265073 - 8e-9 At4g25790 allergen V5/Tpx-1-related family protein C.G. S.X.
0.11 2e-14 79 Zea mays Zm.10085.1.A1_at BM382598 - - 6e+0 At4g02270 pollen Ole e 1 allergen and extensin family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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