CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0773300

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os02g0773300 AK071811.1 - Pyridoxal phosphate-dependent deaminase familyprotein 3e-12 At1g48420 D-CDES (D-CYSTEINE DESULFHYDRASE) S.X. H.G.
0.80 94.6 Os08g0562700 AK066773.1 - Aminopeptidase N 4e-44 At1g63770 peptidase M1 family protein S.X. H.G.
0.73 91.1 Os10g0464400 AY332469.1 - Riboflavin kinase / FAD synthetase family protein 3e-22 At4g21470 ATFMN/FHY (riboflavin kinase/FMN hydrolase) S.X. H.G.
0.50 68.0 Os02g0830100 AK065077.1 - Oligopeptidase A 7e-24 At5g65620 peptidase M3 family protein / thimet oligopeptidase family protein S.X. H.G.
0.50 68.0 Os05g0101200 AY262026.1 - Peroxisomal membrane anchor protein (Pex14p)domain containing protein 1e+0 At5g61660 glycine-rich protein S.X. H.G.
0.35 41.7 Os01g0104100 AK072797.1 - The start codon is not identified. 1e-2 At3g54360 protein binding / zinc ion binding S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
7.7 97.6 GSM357122 14-day-old seedling, rep 1 GSE14275 Expression data for heat shock in rice seedlings
7.7 97.6 GSM357133 14-day-old seedling, rep 2 GSE14275 Expression data for heat shock in rice seedlings
7.1 97.4 GSM357134 14-day-old seedling, rep 3 GSE14275 Expression data for heat shock in rice seedlings
4.3 96.1 GSM173093 Rice OsSRT1 RNAi transgenic line LM2 GSE7197 Down-regulation of OsSRT1 induces DNA fragmentation and cell death in rice
3.8 95.7 GSM173094 Rice OsSRT1 RNAi transgenic line LM3 GSE7197 Down-regulation of OsSRT1 induces DNA fragmentation and cell death in rice
3.8 95.7 GSM207567 Mudanjiang8 wild type control rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
3.7 95.6 GSM154953 Leaf_DMSO-treatment_120min_replicate 3 GSE6719 Cytokinin responsive genes in rice
3.6 95.5 GSM173089 Rice MH63 Control3 GSE7197 Down-regulation of OsSRT1 induces DNA fragmentation and cell death in rice
3.4 95.2 GSM154952 Leaf_DMSO-treatment_120min_replicate 2 GSE6719 Cytokinin responsive genes in rice
3.1 94.8 GSM207564 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 2e-2 42 Os02g0731500 AU075971 - ABA induced plasma membrane protein PM 19 1e+1 At4g21830 methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein C.G. S.X.
0.01 4e-1 38 Os08g0143600 9636.m00406 - Lipase, class 3 family protein 1e-2 At1g06800 lipase class 3 family protein C.G. S.X.
0.01 4e-1 38 Os10g0465000 AK111526.1 - The start codon is not identified. 4e+0 At4g05497 F-box family protein C.G. S.X.
0.01 1e+0 36 Os02g0128200 AK111901.1 - Basic-leucine zipper (bZIP) transcription factordomain containing protein 2e-1 At4g36730 GBF1 C.G. S.X.
0.01 1e+0 36 Os09g0503400 AK099796.1 - Leucyl-tRNA synthetase archae/euk cytosolic, classIa family protein 2e-12 At1g09620 ATP binding / aminoacyl-tRNA ligase/ leucine-tRNA ligase/ nucleotide binding C.G. S.X.
0.01 1e+0 36 Os12g0233800 U04295.1 - Basic-leucine zipper (bZIP) transcription factordomain containing protein 1e-12 At2g35530 bZIP transcription factor family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.18 3e-12 73 Arabidopsis thaliana At1g48420 841263 D-CDES (D-CYSTEINE DESULFHYDRASE) Encodes an enzyme that decomposes D-cysteine into pyruvate, H2S, and NH3. Only D-cysteine but not L-cysteine was converted by D-CDes to pyruvate, H2S, and NH3. Unlike homologous bacterial enzymes, it does not have 1-aminocyclopropane-1-carboxylate deaminase activity. - - - C.G. S.X.
0.20 2e-11 71 Glycine max Gma.9531.1.S1_at CA820670 - - 2e-15 At1g48420 D-CDES (D-CYSTEINE DESULFHYDRASE) C.G. S.X.
0.67 0 1180 Hordeum vulgare Contig5623_at Contig5623 - - 8e-7 At1g48420 D-CDES (D-CYSTEINE DESULFHYDRASE) C.G. S.X.
0.24 1e-15 85 Populus trichocarpa PtpAffx.2095.1.S1_at CK087303 hypothetical protein - 1e-26 At1g48420 D-CDES (D-CYSTEINE DESULFHYDRASE) C.G. S.X.
0.65 0 1108 Triticum aestivum Ta.3402.1.S1_at BJ211240 - - 3e-6 At1g48420 D-CDES (D-CYSTEINE DESULFHYDRASE) C.G. S.X.
0.11 9e-7 54 Vitis vinifera 1621928_at CF405830 - - 2e-2 At1g48420 D-CDES (D-CYSTEINE DESULFHYDRASE) C.G. S.X.
0.68 0 1053 Zea mays Zm.5521.1.S1_at BG837230 hypothetical protein LOC100191348 - 3e-9 At1g48420 D-CDES (D-CYSTEINE DESULFHYDRASE) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006520 The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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