Gene omics information

Query gene ID	Os02g0764500
Gene name
Organism	Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.75	91.9	Os02g0764500	AK066291.1	-	Lhca5 protein	8e-3	At1g45474	LHCA5	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.86	96.4	Os08g0162600	AK060121.1	-	Rubredoxin-type Fe(Cys)4 protein family protein	6e-22	At5g17170	ENH1 (enhancer of sos3-1)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.80	94.6	Os08g0553800	AK065711.1	-	Isoflavone reductase family protein	1e-25	At4g35250	vestitone reductase-related	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.80	94.6	Os01g0912700	AK068528.1	-	Conserved hypothetical protein	1e-1	At2g01340	unknown protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.73	91.1	Os03g0311300	AK073167.1	-	The start codon is not identified.	1e-27	At1g56500	haloacid dehalogenase-like hydrolase family protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.73	91.1	Os12g0420200	CB652532	-	38 kDa ribosome-associated protein	1e+0	At1g31250	proline-rich family protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.71	89.6	Os07g0171100	AK066475.1	-	TPR-like domain containing protein	2e-16	At1g55480	binding / protein binding	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
9.2	97.9	GSM174883	A mock 3 dpi rep 1 with array type rice from Affymetrix	GSE7256	Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
8.3	97.7	GSM421702	XOO, 24 hai - rep4	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
8.1	97.7	GSM421682	XOC, 24 hai - rep4	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
7.2	97.4	GSM174888	C mock 3 dpi rep 2 with array type rice from Affymetrix	GSE7256	Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
7.1	97.4	GSM421720	MOCK, 24 hai - rep2	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
6.9	97.3	GSM421722	MOCK, 24 hai - rep4	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
6.9	97.3	GSM174885	B FR13 3 dpi rep 1 with array type rice from Affymetrix	GSE7256	Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
6.6	97.3	GSM421690	XOO, 2 hai - rep4	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
6.4	97.2	GSM421708	MOCK, 2 hai - rep2	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
6.4	97.2	GSM421670	XOC, 2 hai - rep4	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	7e-2	40	Os02g0114800	9630.m00140	-	Myb, DNA-binding domain containing protein	3e-5	At3g01530	AtMYB57 (myb domain protein 57)	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.02	1e+0	36	Os02g0815400	AK061270.1	-	Conserved hypothetical protein	3e-9	At5g37360	unknown protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.02	1e+0	36	Os07g0287400	AK105204.1	-	Plant lipid transfer/seed storage/trypsin-alphaamylase inhibitor domain containing protein	6e+0	At1g70895	CLE17 (CLAVATA3/ESR-RELATED 17)	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.01	1e+0	36	Os01g0615300	AK061211.1	-	Transferase family protein	2e-1	At3g03480	CHAT (acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase)	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.01	1e+0	36	Os02g0697600	AK121757.1	-	AAA ATPase, central region domain containingprotein	5e-43	At5g16930	AAA-type ATPase family protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.01	1e+0	36	Os04g0389800	AK109628.1	-	Acetohydroxyacid synthase	3e-1	At5g53870	plastocyanin-like domain-containing protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.01	1e+0	36	Os05g0212100	AK067394.1	-	-	2e-2	At3g49170	EMB2261 (embryo defective 2261)	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.13	8e-3	42	Arabidopsis thaliana	At1g45474	841099	LHCA5	Encodes a component of the light harvesting complex of photosystem I.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.05	1e-2	42	Glycine max	Gma.12238.1.S1_at	AW596295	-	-	2e-16	At1g45474	LHCA5	C.G.	S.X.	Please select
0.42	4e-139	494	Hordeum vulgare	Contig7863_at	Contig7863	-	-	6e+0	At5g28450	chlorophyll A-B binding protein, chloroplast, putative / LHCI type II CAB, putative	C.G.	S.X.	Please select
0.06	3e-6	54	Populus trichocarpa	Ptp.7044.1.S1_at	DN489077	light-harvesting complex I protein Lhca5	-	4e-11	At1g45474	LHCA5	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.44	6e-155	547	Triticum aestivum	Ta.881.1.S1_a_at	CK213344	-	-	9e+0	At4g24974	-	C.G.	S.X.	Please select
0.03	6e-1	34	Vitis vinifera	1611464_at	CF215949	hypothetical protein LOC100255844	-	2e-8	At1g45474	LHCA5	C.G.	S.X.	Please select
0.40	2e-122	438	Zea mays	Zm.8907.1.A1_at	BG320013	chlorophyll a-b binding protein 4	-	8e-1	At1g45474	LHCA5	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name
L	GO:0009765	Absorption and transfer of the energy absorbed from light photons between photosystem reaction centers.

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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