Gene omics information

Query gene ID	Os02g0758800
Gene name
Organism	Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.46	60.9	Os02g0758800	AK071537.1	-	Plastocyanin-like domain containing protein	5e-4	At2g21060	ATGRP2B (GLYCINE-RICH PROTEIN 2B)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.73	91.1	Os07g0642200	AK058442.1	-	Lipolytic enzyme, G-D-S-L family protein	1e-2	At1g28590	lipase, putative	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.50	68.0	Os07g0280200	AK108656.1	-	AMP-dependent synthetase and ligase domaincontaining protein	2e-2	At5g63380	4-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.50	68.0	Os12g0454800	AY572461.1	-	Histidine kinase	7e-3	At5g10530	lectin protein kinase, putative	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.37	45.0	Os04g0588700	AK099941.1	-	ABC transporter, transmembrane region domaincontaining protein	9e-6	At3g59140	ATMRP14	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.26	25.6	Os02g0722400	AK070030.1	-	Amino acid transporter c (Fragment)	2e-4	At5g23810	AAP7	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
25.1	99.5	GSM262010	Nipponbare, 2 days after mock-infection, biological replicate #1	GSE10373	Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
20.9	99.2	GSM262011	Nipponbare, 2 days after mock-infection, biological replicate #2	GSE10373	Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
19.3	99.0	GSM262013	Nipponbare, 2 days after infection with S. hermonthica, biological replicate #2	GSE10373	Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
14.0	98.5	GSM262000	IAC165, 2 days after infection with S. hermonthica, biological replicate #1	GSE10373	Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
13.1	98.4	GSM262018	Nipponbare, 11 days after mock-infection, biological replicate #1	GSE10373	Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
12.0	98.3	GSM262014	Nipponbare, 4 days after mock-infection, biological replicate #1	GSE10373	Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
11.6	98.2	GSM262012	Nipponbare, 2 days after infection with S. hermonthica, biological replicate #1	GSE10373	Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
11.4	98.2	GSM261999	IAC165, 2 days after mock-infection, biological replicate #2	GSE10373	Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
10.4	98.1	GSM262015	Nipponbare, 4 days after mock-infection, biological replicate #2	GSE10373	Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
8.7	97.8	GSM377075	Genomic DNA - 45 day old leaf sample - mutant g650	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.18	9e-23	109	Os06g0218600	AK072802.1	-	Plastocyanin-like domain containing protein	8e-6	At1g72230	plastocyanin-like domain-containing protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.10	3e-7	57	Os09g0469300	AK059930.1	-	Plastocyanin-like domain containing protein	1e-1	At1g72230	plastocyanin-like domain-containing protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.06	8e-14	79	Os08g0482700	AK066830.1	-	Plastocyanin-like domain containing protein	4e-2	At3g63230	unknown protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.04	8e-14	79	Os06g0133800	AK105053.1	-	The start codon is not identified.	1e-49	At2g45290	transketolase, putative	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.03	9e-23	109	Os06g0218500	AK100667.1	-	MCM family protein	1e-56	At2g14050	MCM9	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.03	1e-6	56	Os10g0573400	AK061525.1	-	Conserved hypothetical protein	9e-3	At4g36780	transcription regulator	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	5e-4	46	Arabidopsis thaliana	At2g21060	816641	ATGRP2B (GLYCINE-RICH PROTEIN 2B)	glycine-rich protein (AtGRP2b)	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	3e-3	44	Glycine max	HgAffx.22843.2.S1_at	CB374890	-	-	1e-2	At3g52480	unknown protein	C.G.	S.X.	Please select
0.34	6e-70	264	Hordeum vulgare	Contig13477_at	Contig13477	-	-	2e-3	At1g72230	plastocyanin-like domain-containing protein	C.G.	S.X.	Please select
0.04	3e-3	44	Populus trichocarpa	PtpAffx.224082.1.S1_x_at	pmrna42319	hypothetical protein	-	1e-2	At5g61030	GR-RBP3 (glycine-rich RNA-binding protein 3)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.27	3e-58	226	Triticum aestivum	TaAffx.62926.1.S1_at	CD865950	-	-	4e-4	At1g72230	plastocyanin-like domain-containing protein	C.G.	S.X.	Please select
0.06	2e-1	36	Vitis vinifera	1616806_at	CF605749	hypothetical protein LOC100259004	-	6e-2	At2g01340	unknown protein	C.G.	S.X.	Please select
0.22	5e-21	101	Zea mays	Zm.3657.1.A1_s_at	BG874068	-	-	1e+0	At5g42635	glycine-rich protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name
L	GO:0022900	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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