CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0753900

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os02g0753900 9630.m05091 - Conserved hypothetical protein 6e-2 At5g15820 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.80 94.6 Os07g0507500 AK100690.1 - Hypothetical protein 3e-1 At2g01080 - S.X. H.G.
0.71 89.6 Os03g0212300 AK070861.1 - Transcriptional factor B3 family protein 7e-1 At1g64370 unknown protein S.X. H.G.
0.63 82.7 Os01g0122000 AK109465.1 - TRAF-like domain containing protein 8e-1 At5g18748 unknown protein S.X. H.G.
0.56 76.3 Os08g0554100 AK120710.1 - Rhamnogalacturonate lyase family protein 2e-5 At4g24430 lyase S.X. H.G.
0.40 51.1 Os08g0220400 AK106909.1 - Pectinesterase family protein 2e-1 At3g11820 SYP121 (SYNTAXIN OF PLANTS 121) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
67.0 99.9 GSM195220 stigma 3, biological rep 2 GSE7951 Genome-wide gene expression profiling of rice stigma
62.2 99.9 GSM195219 stigma 2, biological rep 2 GSE7951 Genome-wide gene expression profiling of rice stigma
55.6 99.9 GSM195218 stigma 1, biological rep1 GSE7951 Genome-wide gene expression profiling of rice stigma
53.5 99.9 GSM195222 Ovary 2, biological rep 2 GSE7951 Genome-wide gene expression profiling of rice stigma
40.9 99.9 GSM195223 Ovary 3, biological rep 3 GSE7951 Genome-wide gene expression profiling of rice stigma
36.5 99.8 GSM195221 Ovary 1, biological rep 1 GSE7951 Genome-wide gene expression profiling of rice stigma
6.9 97.3 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.6 97.3 GSM195227 Anther GSE7951 Genome-wide gene expression profiling of rice stigma
6.5 97.2 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.2 97.1 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 1e-1 40 Os07g0609500 9635.m04190 - - 2e-3 At4g09462 - C.G. S.X.
0.01 1e-1 40 Os09g0474100 AK121418.1 - Basic helix-loop-helix dimerisation region bHLHdomain containing protein 5e-15 At2g18300 basic helix-loop-helix (bHLH) family protein C.G. S.X.
0.01 1e-1 40 Os10g0334700 NM_195798.1 - - 2e+0 At5g12910 histone H3, putative C.G. S.X.
0.01 1e-1 40 Os11g0154500 AK109939.1 - No apical meristem (NAM) protein domain containingprotein 8e-5 At1g11112 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 6e-2 40 Arabidopsis thaliana At5g15820 831439 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVB - - - C.G. S.X.
0.02 2e-2 42 Glycine max GmaAffx.65939.1.A1_at CD417793 - - 1e+0 At5g14910 heavy-metal-associated domain-containing protein C.G. S.X.
0.02 5e-1 36 Hordeum vulgare HF21N04r_at HF21N04r - - 2e+0 At4g19150 ankyrin repeat family protein C.G. S.X.
0.01 2e-2 42 Populus trichocarpa PtpAffx.211681.1.S1_s_at pmrna22898 outward rectifying potassium channel /// outward rectifying potassium channel - 5e-7 At5g46370 KCO2 (CA2+ ACTIVATED OUTWARD RECTIFYING K+ CHANNEL 2) C.G. S.X.
0.06 2e-11 71 Triticum aestivum Ta.4854.1.A1_at BJ272966 - - 1e+0 At5g18310 unknown protein C.G. S.X.
0.02 7e-2 38 Vitis vinifera 1622507_at CB975105 - - 6e-20 At1g51410 cinnamyl-alcohol dehydrogenase, putative (CAD) C.G. S.X.
0.02 4e-1 36 Zea mays Zm.6580.2.A1_a_at AI619113 succinyl-CoA ligase beta-chain /// succinyl-CoA ligase beta-chain - 4e-22 At2g20420 succinyl-CoA ligase (GDP-forming) beta-chain, mitochondrial, putative / succinyl-CoA synthetase, beta chain, putative / SCS-beta, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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