CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0739700

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.88 96.8 Os02g0739700 AK111537.1 - Transcription factor E2F/dimerisation partner(TDP) family protein 3e+0 At4g19480 unknown protein S.X. H.G.
0.71 89.6 Os09g0547200 AK073078.1 - Eukaryotic protein of unknown function DUF292domain containing protein 1e-9 At4g35730 unknown protein S.X. H.G.
0.71 89.6 Os03g0288900 AK100329.1 - Hypothetical protein 3e-1 At1g05300 ZIP5 S.X. H.G.
0.68 87.5 Os02g0829100 AB037145.1 - Nucleic acid-binding OB-fold domain containingprotein 3e+0 At5g01390 DNAJ heat shock protein, putative S.X. H.G.
0.68 87.5 Os01g0191800 AK102360.1 - Serine/threonine-protein kinase 12 (EC 2.7.1.37)(Aurora-B) (Fragment) 1e-17 At2g25880 AtAUR2 (AtAurora2) S.X. H.G.
0.67 87.2 Os04g0228100 AK059410.1 - Conserved hypothetical protein 3e-6 At4g02800 unknown protein S.X. H.G.
0.67 87.2 Os12g0120000 AK105399.1 - Plant protein of unknown function DUF936 familyprotein 1e+0 At2g44560 AtGH9B11 (Arabidopsis thaliana glycosyl hydrolase 9B11) S.X. H.G.
0.65 83.8 Os05g0476200 AK063430.1 - Replication origin activator 2 6e-86 At5g46280 DNA replication licensing factor, putative S.X. H.G.
0.65 83.8 Os03g0587200 AK121995.1 - Kinesin, motor region domain containing protein 8e-6 At3g20150 kinesin motor family protein S.X. H.G.
0.64 83.4 Os07g0105700 AK063949.1 - Carboxy-terminal kinesin 2 (XCTK2) 9e-8 At4g05190 ATK5 (ARABIDOPSIS THALIANA KINESIN 5) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
16.7 98.8 GSM409432 9311_young panicle 2cm, biological rep3 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
15.2 98.7 GSM409431 9311_young panicle 2cm, biological rep2 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
14.9 98.6 GSM409433 9311_young panicle 2cm, biological rep4 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
13.3 98.4 GSM409434 9311_young panicle 2cm, biological rep5 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
13.2 98.4 GSM409430 9311_young panicle 2cm, biological rep1 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
13.1 98.4 GSM409428 Nipponbare_young panicle 2cm, biological rep4 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
11.3 98.2 GSM409427 Nipponbare_young panicle 2cm, biological rep3 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
11.0 98.2 GSM409422 Nipponbare_young panicle 2cm, biological rep2 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
10.2 98.0 GSM159187 SAM, biological rep 2 GSE6893 Expression data for reproductive development in rice
9.3 97.9 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.33 6e-65 250 Os06g0245900 AK120032.1 - Transcription factor E2F/dimerisation partner(TDP) family protein 3e+0 At5g05550 transcription factor C.G. S.X.
0.03 7e-3 44 Os12g0160000 AK064766.1 - Hypothetical protein 1e+0 At1g26450 beta-1,3-glucanase-related C.G. S.X.
0.02 3e-8 61 Os08g0433200 AK099471.1 - Conserved hypothetical protein 2e-4 At1g23110 unknown protein C.G. S.X.
0.02 1e-4 50 Os02g0658100 AB114830.1 - Aquaporin TIP2.1 (Tonoplast intrinsic protein 2.1)(Delta-tonoplast intrinsic protein) (Delta-TIP) 7e-19 At3g16240 DELTA-TIP C.G. S.X.
0.02 2e-3 46 Os03g0215700 AK099772.1 - Myosin II heavy chain-like family protein 3e-1 At2g38610 KH domain-containing protein C.G. S.X.
0.02 7e-3 44 Os05g0466600 AK119240.1 - - 7e-18 At5g59690 histone H4 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 3e+0 34 Arabidopsis thaliana At4g19480 827689 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.07 5e-3 44 Glycine max Gma.1509.1.S1_at BE820688 - - 8e-7 At3g48160 DEL1 (DP-E2F-LIKE 1) C.G. S.X.
0.02 1e-1 38 Hordeum vulgare Contig4315_at Contig4315 - - 1e+0 At1g03700 - C.G. S.X.
0.03 2e-2 42 Populus trichocarpa PtpAffx.135670.1.S1_at CK096553 repressor, antagonist of e2f-dp complex - 2e-16 At3g48160 DEL1 (DP-E2F-LIKE 1) C.G. S.X.
0.05 6e-8 59 Triticum aestivum Ta.7352.2.A1_a_at BJ318904 Transcription regulator of the cell cycle TaE2Fe - 1e+0 At5g26800 unknown protein C.G. S.X.
0.02 1e+0 34 Vitis vinifera 1622786_at CF207035.1 hypothetical protein LOC100246765 - 2e-8 At5g61210 SNAP33 (SOLUBLE N-ETHYLMALEIMIDE-SENSITIVE FACTOR ADAPTOR PROTEIN 33) C.G. S.X.
0.07 6e-6 52 Zea mays Zm.5397.1.A1_at AI621755 - - 3e+0 At5g37055 SEF (SERRATED LEAVES AND EARLY FLOWERING) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0051726 Any process that modulates the rate or extent of progression through the cell cycle.
L GO:0006355 Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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