CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0734300

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.53 71.3 Os02g0734300 AK059780.1 - NUDIX hydrolase domain containing protein 5e-1 At2g01670 atnudt17 (Arabidopsis thaliana Nudix hydrolase homolog 17) S.X. H.G.
0.46 60.9 Os04g0503600 AK068552.1 - Protein kinase domain containing protein 2e+0 At5g58940 CRCK1 (CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 1) S.X. H.G.
0.43 55.4 Os02g0475300 AK120516.1 - Membrane attack complexcomponent/perforin/complement C9 family protein 5e+0 At5g08590 SNRK2.1 (SNF1-RELATED PROTEIN KINASE 2.1) S.X. H.G.
0.40 51.1 Os11g0703400 AB117996.1 - Snf7 family protein 2e-19 At2g06530 VPS2.1 S.X. H.G.
0.40 51.1 Os04g0451900 9632.m03567 - Protein phosphatase 2C-like domain containingprotein 6e-11 At1g22280 protein phosphatase 2C, putative / PP2C, putative S.X. H.G.
0.22 19.4 Os02g0166600 AK069371.1 - Conserved hypothetical protein 5e-2 At5g39540 - S.X. H.G.
0.13 8.2 Os02g0682500 AK112090.1 - TRANSPARENT TESTA GLABRA 1 protein (TTG1 protein) 2e-1 At5g52060 ATBAG1 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
15.6 98.7 GSM278848 WuYun3-non-infected, biological rep2 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
10.5 98.1 GSM154949 Leaf_tZ-treatment_30min_replicate 2 GSE6719 Cytokinin responsive genes in rice
9.2 97.9 GSM154948 Leaf_tZ-treatment_30min_replicate 1 GSE6719 Cytokinin responsive genes in rice
7.9 97.6 GSM173080 Rice MH63 Control2 GSE7197 Down-regulation of OsSRT1 induces DNA fragmentation and cell death in rice
7.9 97.6 GSM278854 KT95-418-non-infected, biological rep2 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
7.4 97.5 GSM154950 Leaf_tZ-treatment_30min_replicate 3 GSE6719 Cytokinin responsive genes in rice
7.0 97.4 GSM278853 KT95-418-non-infected, biological rep1 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
5.7 96.9 GSM173089 Rice MH63 Control3 GSE7197 Down-regulation of OsSRT1 induces DNA fragmentation and cell death in rice
5.7 96.9 GSM159181 Mature leaf, biological rep 2 GSE6893 Expression data for reproductive development in rice
5.3 96.7 GSM154956 Leaf_tZ-treatment_120min_replicate 3 GSE6719 Cytokinin responsive genes in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 4e-6 54 Os04g0399300 AK105282.1 - NUDIX hydrolase domain containing protein 2e-2 At5g17600 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.03 7e-2 40 Os02g0552200 9630.m03307 - UvrB, C-terminal UvrC-binding domain containingprotein 2e+0 At5g55570 unknown protein C.G. S.X.
0.02 2e-2 42 Os01g0934100 AK100995.1 - C2 domain containing protein 7e-1 At5g62720 integral membrane HPP family protein C.G. S.X.
0.02 7e-2 40 Os04g0624500 AK108237.1 - Polyphenol oxidase (EC 1.10.3.1) (Fragment) 2e-1 At2g37340 RSZ33 C.G. S.X.
0.02 7e-2 40 Os10g0539700 AK120628.1 - Conserved hypothetical protein 1e+0 At2g11890 adenylate cyclase C.G. S.X.
0.02 3e-1 38 Os11g0207600 9639.m00957 - Myb, DNA-binding domain containing protein 7e-4 At1g73410 MYB54 (MYB DOMAIN PROTEIN 54) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 5e-1 36 Arabidopsis thaliana At2g01670 814696 atnudt17 (Arabidopsis thaliana Nudix hydrolase homolog 17) F:hydrolase activity;P:biological_process unknown;C:unknown;MBPOF - - - C.G. S.X.
0.03 1e-2 42 Glycine max PsAffx.C139000024_at PsAffx.C139000024 - - 5e+0 At1g79780 - C.G. S.X.
0.27 6e-33 141 Hordeum vulgare Contig6467_at Contig6467 - - 7e+0 At3g53020 STV1 (SHORT VALVE1) C.G. S.X.
0.03 3e+0 34 Populus trichocarpa PtpAffx.220605.1.S1_at pmrna37010 - - 2e+0 At1g62180 APR2 (5'ADENYLYLPHOSPHOSULFATE REDUCTASE 2) C.G. S.X.
0.40 4e-94 345 Triticum aestivum Ta.512.2.S1_at BQ162169 - - 6e-1 At5g55430 unknown protein C.G. S.X.
0.03 1e+1 30 Vitis vinifera 1617200_at CD717033 - - 3e-7 At2g31070 TCP10 (TCP DOMAIN PROTEIN 10) C.G. S.X.
0.41 3e-124 444 Zea mays Zm.9048.2.A1_at BG321152 nudix hydrolase 4 - 5e-1 At1g13420 ST4B (SULFOTRANSFERASE 4B) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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