CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0711900

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.59 78.0 Os02g0711900 BM038288 - Conserved hypothetical protein 6e+0 At3g17130 invertase/pectin methylesterase inhibitor family protein S.X. H.G.
0.29 31.1 Os01g0723100 AK059087.1 - Senescence-associated family protein 5e-2 At1g30475 - S.X. H.G.
0.07 3.7 Os01g0191300 AK061716.1 - No apical meristem (NAM) protein domain containingprotein 1e-5 At4g29230 anac075 (Arabidopsis NAC domain containing protein 75) S.X. H.G.
0.07 3.7 Os01g0106600 AK061314.1 - Chitin-binding lectin 1 precursor (PL-I) 8e-3 At1g30475 - S.X. H.G.
0.04 2.0 Os01g0802100 AK067589.1 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase,chloroplast precursor (EC 2.7.1.148) (CMK)(4-(cytidine-5'-diphospho)-2-C-methyl- D-erythritolkinase) (CDPMEK) 4e-15 At2g26930 ATCDPMEK (4-(CYTIDINE 5'-PHOSPHO)-2-C-METHYL-D-ERITHRITOL KINASE) S.X. H.G.
0.03 1.4 Os01g0880400 AK066678.1 - Protein of unknown function DUF231 domaincontaining protein 3e-1 At3g54260 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
15.3 98.7 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.8 98.5 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.4 98.5 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.9 98.3 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.7 98.2 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.5 98.2 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.9 98.0 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.8 98.0 GSM377079 Genomic DNA - 45 day old leaf sample - mutant g6686 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.7 98.0 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.1 97.9 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.14 2e-29 131 Os06g0500300 CB669548 - Hypothetical protein 3e+0 At5g66110 metal ion binding C.G. S.X.
0.06 5e-11 69 Os09g0364800 AK068537.1 - Heavy metal transport/detoxification proteindomain containing protein 2e-2 At1g22990 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related C.G. S.X.
0.03 2e-4 48 Os04g0244800 AK121488.1 - Heavy metal transport/detoxification proteindomain containing protein 5e-10 At4g38580 ATFP6 (FARNESYLATED PROTEIN 6) C.G. S.X.
0.03 8e-4 46 Os04g0547500 9632.m04453 - - 5e-4 At5g47220 ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2) C.G. S.X.
0.02 8e-4 46 Os10g0204100 AK120883.1 - Zn-finger, RING domain containing protein 3e-13 At3g09770 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 6e+0 32 Arabidopsis thaliana At3g17130 820970 invertase/pectin methylesterase inhibitor family protein F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:unknown;C:endomembrane system;P - - - C.G. S.X.
0.04 6e-1 36 Glycine max Gma.16385.1.A1_at BE657757 - - 1e+0 At5g56600 PRF3 (PROFILIN 3) C.G. S.X.
0.05 5e-5 48 Hordeum vulgare HVSMEn0017O18r2_at HVSMEn0017O18r2 - - 1e-2 At1g22990 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related C.G. S.X.
0.03 2e+0 34 Populus trichocarpa PtpAffx.88591.1.A1_s_at CV259964 - - 8e-1 At2g46190 - C.G. S.X.
0.10 1e-4 48 Triticum aestivum TaAffx.50923.1.S1_at CA733414 - - 3e-1 At5g03030 DNAJ heat shock N-terminal domain-containing protein C.G. S.X.
0.06 8e-3 40 Vitis vinifera 1609425_at CA815345 hypothetical protein LOC100254317 - 2e-5 At5g17450 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related C.G. S.X.
0.04 3e-3 42 Zea mays Zm.11872.1.A1_at BM381418 metal ion binding protein - 7e-2 At4g39700 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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