CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0702300

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.88 96.8 Os02g0702300 AK100068.1 - Conserved hypothetical protein 7e+0 At4g25845 unknown protein S.X. H.G.
0.31 34.5 Os02g0562200 9630.m03375 - - 4e+0 At5g05120 zinc finger (C2H2 type) family protein S.X. H.G.
0.14 9.3 Os04g0458600 AK106058.1 - Non-cell-autonomous protein pathway2 3e-3 At3g47800 aldose 1-epimerase family protein S.X. H.G.
0.07 3.7 Os02g0121900 AK109567.1 - TPR-like domain containing protein 3e-1 At2g44840 ERF13 (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13) S.X. H.G.
0.05 2.5 Os12g0196200 9640.m00883 - - 3e+0 At5g06030 self-incompatibility protein-related S.X. H.G.
0.04 2.0 Os08g0539200 AK109065.1 - Conserved hypothetical protein 2e+0 At3g22820 allergen-related S.X. H.G.
0.02 1.0 Os04g0493600 BU672803 - Chitin-binding, type 1 domain containing protein 9e-1 At5g40250 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.01 0.5 Os10g0360100 AK121279.1 - Sugar transporter protein 2e-2 At1g23150 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
129.8 100.0 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
33.5 99.8 GSM302923 seedling_rep2 GSE11966 Expression data from rice embryo,endosperm,root,leaf and seedling
23.0 99.3 GSM375647 Taichung 65_shoot_replicate 1 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
22.5 99.3 GSM304653 Mutant stable line GSE12069 Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
20.9 99.2 GSM375648 Taichung 65_shoot_replicate 2 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
18.2 98.9 GSM375649 Taichung 65_shoot_replicate 3 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
11.3 98.2 GSM173086 Rice MH63 Control1 GSE7197 Down-regulation of OsSRT1 induces DNA fragmentation and cell death in rice
8.5 97.7 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.3 97.7 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.8 97.6 GSM304669 Control for the stable mutant rice line (1) GSE12069 Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.34 6e-162 573 Os12g0550800 AK061828.1 - Hypothetical protein 2e+0 At3g29431 unknown protein C.G. S.X.
0.29 5e-79 297 Os05g0249100 AK064291.1 - Conserved hypothetical protein 1e+0 At1g64680 unknown protein C.G. S.X.
0.12 4e-43 178 Os09g0105600 9637.m00027 - - 1e+0 At1g68840 RAV2 (REGULATOR OF THE ATPASE OF THE VACUOLAR MEMBRANE) C.G. S.X.
0.10 4e-52 208 Os05g0232800 NM_193898.1 - HAT dimerisation domain containing protein 9e-2 At5g61500 ATG3 C.G. S.X.
0.09 6e-54 214 Os11g0559600 AK064906.1 - Hypothetical protein 1e+0 At3g55420 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 7e+0 34 Arabidopsis thaliana At4g25845 3769784 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.01 2e+0 36 Glycine max GmaAffx.68014.1.S1_at BG352190 - - 2e+0 At2g04515 unknown protein C.G. S.X.
0.01 5e-5 50 Hordeum vulgare Contig2456_at Contig2456 - - 7e+0 At3g06019 unknown protein C.G. S.X.
0.01 2e+0 36 Populus trichocarpa PtpAffx.157.1.A1_at DN491499 - - 4e-1 At3g56580 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.02 8e-9 63 Triticum aestivum Ta.20168.1.S1_at CA672802 - - 6e-1 At3g27210 unknown protein C.G. S.X.
0.01 5e-1 36 Vitis vinifera 1620194_a_at CD011688 hypothetical protein LOC100266384 - 3e-7 At1g71040 LPR2 (Low Phosphate Root2) C.G. S.X.
0.01 3e+0 34 Zea mays Zm.14628.1.A1_at BM075532 - - 8e+0 At3g19790 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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