CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0700600

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.52 69.6 Os02g0700600 AK100966.1 - GAMYB-binding protein 4e-9 At5g45430 protein kinase, putative S.X. H.G.
0.53 71.3 Os07g0690400 AK068590.1 - Protein phosphatase 2C-like 3e-28 At1g68410 protein phosphatase 2C-related / PP2C-related S.X. H.G.
0.42 53.9 Os10g0519600 AK061924.1 - Protein of unknown function DUF791 family protein 8e-32 At3g49310 - S.X. H.G.
0.40 51.1 Os10g0116900 AK121038.1 - Conserved hypothetical protein 5e-6 At2g48080 oxidoreductase, 2OG-Fe(II) oxygenase family protein S.X. H.G.
0.38 46.9 Os05g0465100 AK065821.1 - RabGAP/TBC domain containing protein 4e-38 At3g55020 RabGAP/TBC domain-containing protein S.X. H.G.
0.30 32.7 Os03g0246800 AK070145.1 - Guanine nucleotide exchange factor-like protein 1e-39 At3g60860 guanine nucleotide exchange family protein S.X. H.G.
0.26 25.6 Os12g0238100 AK064983.1 - Exocyst complex component Sec10 family protein 6e-40 At5g12370 SEC10 (EXOCYST COMPLEX COMPONENT SEC10) S.X. H.G.
0.16 11.3 Os04g0599900 AK121748.1 - ENTH1 protein (Fragment) 2e-5 At5g11710 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
15.3 98.7 GSM195227 Anther GSE7951 Genome-wide gene expression profiling of rice stigma
4.9 96.5 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
4.9 96.5 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
4.8 96.5 GSM429983 Rice mutant phoenix (pho) panicle rep1 GSE17194 Genome-wide gene expression profiling of rice Indica cultivar Zhongxian 3037 and mutant phoenix (pho) panicle
4.0 95.9 GSM409427 Nipponbare_young panicle 2cm, biological rep3 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
3.9 95.8 GSM195218 stigma 1, biological rep1 GSE7951 Genome-wide gene expression profiling of rice stigma
3.9 95.8 GSM409430 9311_young panicle 2cm, biological rep1 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
3.9 95.8 GSM409431 9311_young panicle 2cm, biological rep2 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
3.7 95.6 GSM67057 FL478 salt stressed replicate 3 GSE3053 Rice salt expression
3.7 95.6 GSM67054 FL478 control replicate 3 GSE3053 Rice salt expression
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.11 1e-26 123 Os06g0116100 CB683800 - Serine/threonine-protein kinase MAK (EC 2.7.1.37)(Male germ cell- associated kinase) 9e-17 At5g45430 protein kinase, putative C.G. S.X.
0.03 5e-7 57 Os03g0847600 AK066947.1 - GAMYB-binding protein 8e-14 At4g13020 MHK C.G. S.X.
0.02 2e-1 38 Os02g0661300 AK106503.1 - Conserved hypothetical protein 5e-4 At2g17420 NTRA (NADPH-DEPENDENT THIOREDOXIN REDUCTASE A) C.G. S.X.
0.02 6e-1 36 Os01g0820800 AK106944.1 - Conserved hypothetical protein 3e+0 At3g26510 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein C.G. S.X.
0.01 1e-2 44 Os01g0883800 AY114310.1 - Gibberellin 20-oxidase 5e-8 At4g25420 GA20OX1 C.G. S.X.
0.01 1e-2 44 Os04g0619900 9632.m05127 - Ubiquitin domain containing protein 3e-2 At5g38300 unknown protein C.G. S.X.
0.01 3e-2 42 Os12g0459300 AK105224.1 - Nucleic acid-binding OB-fold domain containingprotein 3e-1 At5g43390 - C.G. S.X.
0.01 4e-2 42 Os09g0420000 9637.m02174 - Zn-finger, cysteine-rich C6HC domain containingprotein 5e-1 At1g51510 Y14 C.G. S.X.
0.01 2e+0 36 Os01g0113500 AK106707.1 - Protein kinase domain containing protein 1e+0 At5g51451 unknown protein C.G. S.X.
0.01 3e+0 34 Os12g0130100 AK111431.1 - - 1e+0 At5g45790 ubiquitin thiolesterase C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.10 4e-9 63 Arabidopsis thaliana At5g45430 834579 protein kinase, putative F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MOPFBVA - - - C.G. S.X.
0.06 8e-2 40 Glycine max GmaAffx.88272.2.S1_at BG156388 - - 1e-19 At5g45430 protein kinase, putative C.G. S.X.
0.32 2e-40 167 Hordeum vulgare Contig9454_at Contig9454 - - 9e+0 At5g59030 COPT1 (copper transporter 1) C.G. S.X.
0.08 8e-5 50 Populus trichocarpa PtpAffx.200096.1.S1_at pmrna177 hypothetical protein - 9e-8 At4g19110 protein kinase, putative C.G. S.X.
0.14 6e-36 153 Triticum aestivum Ta.9166.3.S1_a_at CA638022 serine/threonine kinase - 4e+0 At2g41660 MIZ1 (mizu-kussei 1) C.G. S.X.
0.04 3e-7 56 Vitis vinifera 1617325_at CB976208 - - 1e-6 At5g45430 protein kinase, putative C.G. S.X.
0.46 0 813 Zea mays Zm.3664.1.S1_at CF630053 hypothetical protein LOC100192489 - 1e-15 At5g45430 protein kinase, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006468 The process of introducing a phosphate group on to a protein.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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