CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0698100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.70 88.4 Os02g0698100 AK060614.1 - Conserved hypothetical protein 7e-1 At1g78410 VQ motif-containing protein S.X. H.G.
0.58 77.0 Os12g0528300 AK067915.1 - Mu2 adaptin subunit (AP50) of AP2 domaincontaining protein 1e-4 At2g20790 protein binding S.X. H.G.
0.53 71.3 Os12g0498700 AK073582.1 - Protein of unknown function DUF409 family protein 2e-1 At1g11880 transferase, transferring hexosyl groups S.X. H.G.
0.50 68.0 Os04g0628000 AK064525.1 - Arabidopsis thaliana protein of unknown functionDUF794 family protein 6e-2 At3g23930 unknown protein S.X. H.G.
0.48 63.7 Os03g0746600 AK069559.1 - WD40-like domain containing protein 2e-5 At5g50230 nucleotide binding S.X. H.G.
0.43 55.4 Os01g0687600 NM_192106.1 - Conserved hypothetical protein 1e-4 At3g48120 unknown protein S.X. H.G.
0.42 53.9 Os07g0452400 CA762394 - 3'-5' exonuclease domain containing protein 3e-10 At5g24340 3'-5' exonuclease domain-containing protein S.X. H.G.
0.41 52.4 Os03g0107900 AK109533.1 - Exostosin-like family protein 1e-2 At2g28110 FRA8 (FRAGILE FIBER 8) S.X. H.G.
0.40 51.1 Os02g0820600 AK066549.1 - Conserved hypothetical protein 3e+0 At5g13850 NACA3 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3) S.X. H.G.
0.39 48.3 Os09g0448100 AK070628.1 - Cyclin-like F-box domain containing protein 1e+0 At5g01790 unknown protein S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
19.9 99.1 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.4 98.8 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.7 98.6 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.3 98.4 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.2 98.4 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.8 98.4 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.0 98.3 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.6 98.2 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.1 98.2 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
11.1 98.2 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 6e-3 44 Os11g0138700 AK109658.1 - Cyclin-like F-box domain containing protein 2e-1 At1g28307 unknown protein C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 7e-1 36 Arabidopsis thaliana At1g78410 844177 VQ motif-containing protein F:molecular_function unknown;P:response to oxidative stress;C:cellular_component unknown;P - - - C.G. S.X.
0.02 3e-1 38 Glycine max HgAffx.3554.2.A1_at CK351692 - - 1e-2 At2g43070 protease-associated (PA) domain-containing protein C.G. S.X.
0.14 2e-18 93 Hordeum vulgare HI05D03u_at HI05D03u - - 5e+0 At4g10250 ATHSP22.0 C.G. S.X.
0.02 1e+0 36 Populus trichocarpa PtpAffx.224082.1.S1_x_at pmrna42319 hypothetical protein - 1e-2 At5g61030 GR-RBP3 (glycine-rich RNA-binding protein 3) C.G. S.X.
0.03 5e-2 40 Triticum aestivum TaAffx.75796.1.S1_at CA706782 - - 4e+0 At4g32490 plastocyanin-like domain-containing protein C.G. S.X.
0.02 9e-1 34 Vitis vinifera 1614969_at CA810356 hypothetical protein LOC100252305 - 3e+0 At4g00390 transcription regulator C.G. S.X.
0.02 8e-2 38 Zea mays Zm.13685.1.A1_at BM737193 - - 1e+0 At1g70895 CLE17 (CLAVATA3/ESR-RELATED 17) C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage