CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0687900

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.57 77.0 Os02g0687900 AK064814.1 - Peptidase S10, serine carboxypeptidase familyprotein 4e-6 At3g12203 scpl17 (serine carboxypeptidase-like 17) S.X. H.G.
0.53 71.3 Os03g0399900 AK099576.1 - GOS9 protein 7e+0 At4g03290 calcium-binding protein, putative S.X. H.G.
0.35 41.7 Os04g0457500 AU075570 - Gamma-glutamyltranspeptidase family protein 7e+0 At4g12380 unknown protein S.X. H.G.
0.33 38.8 Os06g0601500 CA764046 - ab initio prediction with EST support 1e-9 At5g11260 HY5 (ELONGATED HYPOCOTYL 5) S.X. H.G.
0.28 31.1 Os09g0426800 AK120227.1 - Gl1 protein 3e-1 At4g12950 - S.X. H.G.
0.17 12.6 Os06g0288200 AK071127.1 - Hypothetical protein 8e-1 At2g47400 CP12-1 S.X. H.G.
0.15 10.3 Os07g0510400 AK119544.1 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 2e-1 At4g15550 IAGLU (INDOLE-3-ACETATE BETA-D-GLUCOSYLTRANSFERASE) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
39.3 99.9 GSM195220 stigma 3, biological rep 2 GSE7951 Genome-wide gene expression profiling of rice stigma
32.6 99.8 GSM195218 stigma 1, biological rep1 GSE7951 Genome-wide gene expression profiling of rice stigma
31.0 99.7 GSM195219 stigma 2, biological rep 2 GSE7951 Genome-wide gene expression profiling of rice stigma
17.5 98.9 GSM421701 XOO, 24 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
7.1 97.4 GSM421681 XOC, 24 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
6.8 97.3 GSM421680 XOC, 24 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
6.0 97.0 GSM421721 MOCK, 24 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
5.8 97.0 GSM421703 XOO, 96 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
5.8 97.0 GSM421679 XOC, 24 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
5.5 96.8 GSM421720 MOCK, 24 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.15 6e-19 97 Os03g0730500 AK066477.1 - Peptidase S10, serine carboxypeptidase familyprotein 6e-2 At2g23000 scpl10 (serine carboxypeptidase-like 10) C.G. S.X.
0.14 9e-21 103 Os03g0730700 9631.m05092 - - 2e-1 At2g22980 serine-type carboxypeptidase C.G. S.X.
0.08 1e-41 173 Os01g0848200 CB633945 - Delta 1-pyrroline-5-carboxylate synthetase (P5CS)[Includes: Glutamate 5-kinase (EC 2.7.2.11)(Gamma-glutamyl kinase) (GK) 4e+0 At5g60805 - C.G. S.X.
0.06 3e-17 91 Os02g0574100 AK068280.1 - General substrate transporter family protein 9e-1 At5g25940 early nodulin-related C.G. S.X.
0.04 6e-19 97 Os04g0449000 AK064234.1 - Mitochondrial brown fat uncoupling protein familyprotein 3e+0 At5g60840 unknown protein C.G. S.X.
0.02 5e-16 87 Os10g0420900 AK066224.1 - Hypothetical protein 5e-1 At3g54910 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 4e-6 54 Arabidopsis thaliana At3g12203 820399 scpl17 (serine carboxypeptidase-like 17) F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOB - - - C.G. S.X.
0.02 3e-4 48 Glycine max Gma.2669.1.S1_at CA935964 - - 4e-6 At5g09640 SCPL19 C.G. S.X.
0.06 3e-11 69 Hordeum vulgare Contig17621_at Contig17621 - - 1e-1 At1g73310 scpl4 (serine carboxypeptidase-like 4) C.G. S.X.
0.03 5e-3 44 Populus trichocarpa PtpAffx.216396.1.S1_at pmrna31154 hypothetical protein - 1e-14 At5g36180 scpl1 (serine carboxypeptidase-like 1) C.G. S.X.
0.17 1e-46 188 Triticum aestivum Ta.3507.1.S1_at BQ172406 - - 1e-1 At1g73280 scpl3 (serine carboxypeptidase-like 3) C.G. S.X.
0.04 4e-3 42 Vitis vinifera 1607463_at CB343440 hypothetical protein LOC100255717 - 1e-12 At3g12203 scpl17 (serine carboxypeptidase-like 17) C.G. S.X.
0.06 1e-4 48 Zea mays Zm.17773.1.A1_at CK371251 serine carboxypeptidase 1 - 8e-1 At1g53950 ubiquitin family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006508 The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with the hydrolysis of peptide bonds.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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