CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0673100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.56 76.3 Os02g0673100 AK108963.1 - Protein of unknown function UPF0005 family protein 2e-3 At2g27240 unknown protein S.X. H.G.
0.67 87.2 Os02g0786300 9630.m05407 - Typical P-type R2R3 Myb protein (Fragment) 2e-17 At4g37780 MYB87 (MYB DOMAIN PROTEIN 87) S.X. H.G.
0.39 48.3 Os01g0536400 NM_193243.1 - Isopenicillin N synthase family protein 2e+0 At3g28950 avirulence-responsive protein-related / avirulence induced gene (AIG) protein-related S.X. H.G.
0.33 38.8 Os01g0859500 AK101338.1 - Ocs-element binding factor 3.2 3e-4 At5g07600 oleosin / glycine-rich protein S.X. H.G.
0.20 16.5 Os01g0641800 9629.m04342 - AAA ATPase, central region domain containingprotein 5e-2 At3g55460 SCL30 S.X. H.G.
0.11 6.5 Os01g0200300 AK112091.1 - Hypothetical protein 1e-13 At1g30490 PHV (PHAVOLUTA) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
23.2 99.3 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.0 99.3 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.2 99.3 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.2 99.1 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.6 99.1 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.6 99.1 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.7 98.9 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.9 98.8 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.4 98.8 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.9 98.7 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.35 8e-149 529 Os04g0567200 AK110383.1 - Protein of unknown function UPF0005 family protein 3e-4 At4g17970 unknown protein C.G. S.X.
0.23 1e-101 373 Os02g0673000 AK108650.1 - Conserved hypothetical protein 7e-1 At5g18130 unknown protein C.G. S.X.
0.17 5e-42 174 Os06g0331900 AK120017.1 - Protein of unknown function UPF0005 family protein 1e-3 At3g23230 ethylene-responsive factor, putative C.G. S.X.
0.04 6e-17 91 Os04g0417000 AK063428.1 - Aluminum-activated malate transporter 2e-1 At5g53110 - C.G. S.X.
0.01 5e-2 42 Os06g0692600 AK110462.1 - Protein kinase domain containing protein 3e-2 At1g72300 leucine-rich repeat transmembrane protein kinase, putative C.G. S.X.
0.01 2e-1 40 Os05g0583600 AK108848.1 - Uncharacterized plant-specific domain containingprotein 6e-1 At2g13463 unknown protein C.G. S.X.
0.01 2e-1 40 Os07g0679500 AK102562.1 - BZIP transcription factor RF2b 8e-10 At1g06850 AtbZIP52 (Arabidopsis thaliana basic leucine zipper 52) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e-3 46 Arabidopsis thaliana At2g27240 817266 unknown protein F:unknown;P:biological_process unknown;C:unknown;PBOF - - - C.G. S.X.
0.01 5e-1 38 Glycine max Gma.14137.1.A1_at CD416192 - - 7e-1 At4g20350 unknown protein C.G. S.X.
0.01 7e-1 36 Hordeum vulgare Contig2668_at Contig2668 - - 2e-49 At1g14400 UBC1 (UBIQUITIN CARRIER PROTEIN 1) C.G. S.X.
0.01 5e-1 38 Populus trichocarpa PtpAffx.224454.1.S1_at pmrna43008 hypothetical protein - 2e-7 At1g08440 - C.G. S.X.
0.04 2e-6 56 Triticum aestivum Ta.30659.1.S1_at AB081803.1 ALMT1 - 8e-7 At1g08440 - C.G. S.X.
0.01 1e-1 38 Vitis vinifera 1611781_at CD010979 - - 3e-1 At5g61270 PIF7 (PHYTOCHROME-INTERACTING FACTOR7) C.G. S.X.
0.01 2e-1 38 Zea mays ZmAffx.985.1.A1_at AI834468 - - 1e+1 At4g36900 RAP2.10 (related to AP2 10) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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