CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0658400

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os02g0658400 AK120166.1 - Remorin, C-terminal region domain containingprotein 8e-1 At4g17670 senescence-associated protein-related S.X. H.G.
0.83 95.8 Os10g0358700 AK099994.1 - TPR-like domain containing protein 2e+0 At1g29724 protein binding S.X. H.G.
0.80 94.6 Os12g0596000 AK073530.1 - Lipoate-protein ligase B 7e-2 At1g47580 lipoyltransferase, putative S.X. H.G.
0.73 91.1 Os03g0428000 AK062841.1 - Conserved hypothetical protein 3e-2 At1g28540 unknown protein S.X. H.G.
0.67 87.2 Os10g0145100 AK073677.1 - Cyclin-like F-box domain containing protein 2e-1 At5g64690 neurofilament triplet H protein-related S.X. H.G.
0.27 27.5 Os10g0487600 AK061153.1 - Conserved hypothetical protein 3e+0 At5g56710 60S ribosomal protein L31 (RPL31C) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
36.2 99.8 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
24.2 99.4 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.1 99.4 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.5 99.3 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.0 99.3 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.3 99.2 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.1 99.2 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.0 99.2 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.3 99.1 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.2 99.0 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.45 0 2068 Os02g0658500 AK107591.1 - Hypothetical protein 5e-1 At5g07670 F-box family protein C.G. S.X.
0.02 7e-3 44 Os01g0168300 AK063678.1 - Conserved hypothetical protein 7e-10 At3g56430 - C.G. S.X.
0.01 1e-2 44 Os09g0456800 AK101182.1 - Heat stress transcription factor Spl7 (Heat shocktranscription factor) (Heat shock factor RHSF10) 5e-5 At2g41690 AT-HSFB3 C.G. S.X.
0.01 3e-2 42 Os06g0652000 AB120430.1 - DNA directed RNA polymerase (EC 2.7.7.6) 3e-8 At2g24120 SCA3 (SCABRA 3) C.G. S.X.
0.01 4e-2 42 Os03g0787200 AK103438.1 - IQ calmodulin-binding region domain containingprotein 2e-11 At3g22190 IQD5 (IQ-domain 5) C.G. S.X.
0.01 4e-2 42 Os04g0432200 9632.m03391 - DEAD/DEAH box helicase, N-terminal domaincontaining protein 2e-7 At1g58060 helicase domain-containing protein C.G. S.X.
0.01 1e-1 40 Os08g0107500 AK064053.1 - Protein of unknown function UPF0023 family protein 8e-1 At5g50720 ATHVA22E C.G. S.X.
0.01 4e-1 38 Os01g0697250 9631.m01591 - - 2e+0 At5g54290 cytochrome c biogenesis protein family C.G. S.X.
0.01 4e-1 38 Os04g0665600 AK101951.1 - Phosphate starvation response regulator-likeprotein 2e-2 At1g79430 APL (ALTERED PHLOEM DEVELOPMENT) C.G. S.X.
0.01 4e-1 38 Os12g0612600 9640.m04104 - - 3e-3 At1g22600 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 8e-1 36 Arabidopsis thaliana At4g17670 827487 senescence-associated protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.02 1e+0 36 Glycine max PsAffx.psML005xK13f_at PsAffx.psML005xK13f - - 2e+0 At1g52440 - C.G. S.X.
0.02 4e-1 36 Hordeum vulgare Contig23655_at Contig23655 - - 5e+0 At3g51810 EM1 (LATE EMBRYOGENESIS ABUNDANT 1) C.G. S.X.
0.02 3e-1 38 Populus trichocarpa PtpAffx.217356.1.S1_at pmrna32578 hypothetical protein - 8e-1 At3g48330 PIMT1 (PROTEIN-L-ISOASPARTATE METHYLTRANSFERASE 1) C.G. S.X.
0.02 6e-2 40 Triticum aestivum TaAffx.114128.1.S1_at CA598255 - - 1e+0 At3g49300 proline-rich family protein C.G. S.X.
0.02 3e-1 36 Vitis vinifera 1609929_at CB346194 hypothetical protein LOC100259947 - 3e+0 At5g02440 unknown protein C.G. S.X.
0.01 4e-1 36 Zea mays Zm.5688.1.A1_at AY105372.1 - - 6e-14 At2g19450 TAG1 (TRIACYLGLYCEROL BIOSYNTHESIS DEFECT 1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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