Gene omics information

Query gene ID Os02g0649900
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6787.2Os02g06499009630.m04172-Iron-phytosiderophore transporter protein yellowstripe 12e-5At5g24380YSL2 (YELLOW STRIPE LIKE 2)S.X.H.G.
0.5068.0Os12g0282000AK103636.1-Hypothetical protein8e+0At5g63634unknown proteinS.X.H.G.
0.4660.9Os07g0258400AK103557.1-Metal transporter Nramp6 (AtNramp6)2e-8At1g80830NRAMP1 (NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 1)S.X.H.G.
0.4458.1Os09g01296009637.m00266-Site-specific recombinase family protein9e-1At2g46610arginine/serine-rich splicing factor, putativeS.X.H.G.
0.4458.1Os01g0871600AK103248.1-TGF-beta receptor, type I/II extracellular regionfamily protein2e-1At5g07730unknown proteinS.X.H.G.
0.3846.9Os03g0751100BU673383--5e-28At4g16370ATOPT3 (OLIGOPEPTIDE TRANSPORTER)S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
51.799.9GSM302918leaf_rep1GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
40.599.9GSM302919leaf_rep2GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
33.499.8GSM116398Seedling_Control_rep2GSE5167Rice seedling hormone treatment
32.199.7GSM281585Rice Zhonghua11, biological rep3GSE11175Comparison of transcriptome profile between wild-type and dst mutant plants
30.999.7GSM116402Seedling_BAP treated_rep2GSE5167Rice seedling hormone treatment
28.399.6GSM116195Seedling_Control_rep1GSE5167Rice seedling hormone treatment
27.799.6GSM281584Rice Zhonghua11, biological rep2GSE11175Comparison of transcriptome profile between wild-type and dst mutant plants
26.999.6GSM116400Seedling_IAA treated_rep2GSE5167Rice seedling hormone treatment
20.499.1GSM116401Seedling_BAP treated_rep1GSE5167Rice seedling hormone treatment
18.999.0GSM116399Seedling_IAA treated_rep1GSE5167Rice seedling hormone treatment
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.331e-81305Os04g0542800AK070304.1-Oligopeptide transporter OPT superfamily protein6e-9At5g24380YSL2 (YELLOW STRIPE LIKE 2)C.G.S.X.
0.333e-30135Os02g0650300AK063464.1-Oligopeptide transporter OPT superfamily protein4e-9At4g24120YSL1 (YELLOW STRIPE LIKE 1)C.G.S.X.
0.312e-1999Os04g0542200AK120923.1-Oligopeptide transporter OPT superfamily protein6e-9At5g24380YSL2 (YELLOW STRIPE LIKE 2)C.G.S.X.
0.143e-861Os04g05249009632.m04254-Oligopeptide transporter OPT superfamily protein2e-23At1g65730YSL7 (YELLOW STRIPE LIKE 7)C.G.S.X.
0.071e-759Os04g0524500AK067235.1-Oligopeptide transporter OPT superfamily protein1e-6At1g65730YSL7 (YELLOW STRIPE LIKE 7)C.G.S.X.
0.069e-963Os02g06333009630.m04040-EspB-like protein5e-12At1g65730YSL7 (YELLOW STRIPE LIKE 7)C.G.S.X.
0.051e-1379Os04g0674600AK069645.1-Oligopeptide transporter OPT superfamily protein2e-11At3g17650YSL5 (YELLOW STRIPE LIKE 5)C.G.S.X.
0.051e-1069Os01g0829900AK070618.1-Oligopeptide transporter OPT superfamily protein1e+0At3g17650YSL5 (YELLOW STRIPE LIKE 5)C.G.S.X.
0.033e-861Os04g0524800AK064753.1-Hypothetical protein1e-3At3g55730MYB109 (myb domain protein 109)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.092e-552Arabidopsis thalianaAt5g24380832509YSL2 (YELLOW STRIPE LIKE 2)closest Arabidopsis homolog of Zea maize metal-phytosiderophore/metal-nicotianamine transporter ZmYS1---C.G.S.X.
0.124e-757Glycine maxGma.15578.1.S1_atCD414652--2e-15At5g53550YSL3 (YELLOW STRIPE LIKE 3)C.G.S.X.
0.254e-1789Hordeum vulgareContig16464_atContig16464--9e-6At5g53550YSL3 (YELLOW STRIPE LIKE 3)C.G.S.X.
0.049e-240Populus trichocarpaPtpAffx.225632.1.S1_atpmrna45109--7e-29At1g48370YSL8 (YELLOW STRIPE LIKE 8)C.G.S.X.
0.151e-1895Triticum aestivumTaAffx.113315.1.S1_atCA615901--4e+0At3g24315AtSec20C.G.S.X.
0.052e-550Vitis vinifera1617609_atCF207468hypothetical protein LOC100255514-3e-24At5g24380YSL2 (YELLOW STRIPE LIKE 2)C.G.S.X.
0.398e-55214Zea maysZm.582.1.S1_atAF186234.2yellow stripe1-3e-1At5g24380YSL2 (YELLOW STRIPE LIKE 2)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage