Gene omics information

Query gene ID Os02g0644000
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6382.7Os02g0644000AB081464.1-C13 endopeptidase NP1 (Fragment)2e-23At1g62710BETA-VPE (BETA VACUOLAR PROCESSING ENZYME)S.X.H.G.
0.9499.4Os01g0702500AY333185.1-Dehydrin RAB253e-5At3g50980XERO1 (DEHYDRIN XERO 1)S.X.H.G.
0.8996.9Os04g0510900AK063625.1-Embryo-specific protein 1 (ATS1)9e+0At1g23240caleosin-related family proteinS.X.H.G.
0.8996.9Os05g0569500AF049892.1--6e-10At1g05510-S.X.H.G.
0.8896.8Os03g0277500AK063650.1-Glyoxalase/bleomycin resistanceprotein/dioxygenase domain containing protein2e+1At4g38260unknown proteinS.X.H.G.
0.8896.8Os08g0127900U25968.1-Globulin 1 (Fragment)4e+0At3g55790unknown proteinS.X.H.G.
0.8696.4Os09g0109600AK063582.1-Conserved hypothetical protein1e+0At3g57500unknown proteinS.X.H.G.
0.7993.6Os01g03033009629.m01932-Mitochondrial import inner membrane translocase,subunit Tim17/22 family protein5e-1At2g21660CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2)S.X.H.G.
0.7993.6Os05g0349800AK063677.1-Embryonic abundant protein 17e-3At3g51810EM1 (LATE EMBRYOGENESIS ABUNDANT 1)S.X.H.G.
0.7893.4Os03g0197300AK102651.1-RmlC-like cupin family protein7e-2At5g37200zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
72.999.9GSM159219Seed (S5, 21 - 29 dap), biological rep 1GSE6893Expression data for reproductive development in rice
68.799.9GSM159220Seed (S5, 21 - 29 dap), biological rep 2GSE6893Expression data for reproductive development in rice
66.399.9GSM159221Seed (S5, 21 - 29 dap), biological rep 3GSE6893Expression data for reproductive development in rice
43.699.9GSM159218Seed (S4, 11 - 20 dap), biological rep 3GSE6893Expression data for reproductive development in rice
35.699.8GSM159216Seed (S4, 11 - 20 dap), biological rep 1GSE6893Expression data for reproductive development in rice
26.199.5GSM159217Seed (S4, 11 - 20 dap), biological rep 2GSE6893Expression data for reproductive development in rice
26.099.5GSM195228EmbryoGSE7951Genome-wide gene expression profiling of rice stigma
10.998.1GSM302914emb6D_rep1GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
10.098.0GSM302915emb6D_rep2GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
6.597.2GSM195229EndospermGSE7951Genome-wide gene expression profiling of rice stigma
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.448e-80299Os04g0537900AK103573.1-C13 endopeptidase NP1 (Fragment)1e-6At1g62710BETA-VPE (BETA VACUOLAR PROCESSING ENZYME)C.G.S.X.
0.052e-346Os01g0559600AB025310.1-Vacuolar processing enzyme, alpha-isozymeprecursor (EC 3.4.22.-) (Alpha-VPE)3e-16At4g32940GAMMA-VPE (GAMMA VACUOLAR PROCESSING ENZYME)C.G.S.X.
0.013e-552Os11g0234200AK105440.1-Zn-finger-like, PHD finger domain containingprotein2e-2At1g29380-C.G.S.X.
0.018e-344Os05g01042009633.m00043-Disease resistance protein2e+0At1g28360ERF12 (ERF DOMAIN PROTEIN 12)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.202e-23111Arabidopsis thalianaAt1g62710842569BETA-VPE (BETA VACUOLAR PROCESSING ENZYME)Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteases that is expressed specifically in seeds and is essential for the proper processing of storage proteins.---C.G.S.X.
0.193e-23111Glycine maxGma.968.1.S1_atD28876.1cysteine proteinase-9e-38At1g62710BETA-VPE (BETA VACUOLAR PROCESSING ENZYME)C.G.S.X.
0.354e-29129Hordeum vulgareContig3372_s_atContig3372--6e-2At1g62710BETA-VPE (BETA VACUOLAR PROCESSING ENZYME)C.G.S.X.
0.174e-1377Populus trichocarpaPtpAffx.203177.1.S1_x_atpmrna6297hypothetical protein-5e-27At1g62710BETA-VPE (BETA VACUOLAR PROCESSING ENZYME)C.G.S.X.
0.580912Triticum aestivumTa.14496.1.S1_x_atCK203323--2e-8At4g32940GAMMA-VPE (GAMMA VACUOLAR PROCESSING ENZYME)C.G.S.X.
0.037e-238Vitis vinifera1621718_atBQ794503hypothetical protein LOC100244137-5e-26At2g25940ALPHA-VPE (alpha-vacuolar processing enzyme)C.G.S.X.
0.434e-78291Zea maysZm.12714.1.S1_atAY106221.1vacuolar processing enzyme, beta-isozyme-3e-7At1g62710BETA-VPE (BETA VACUOLAR PROCESSING ENZYME)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006508The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with the hydrolysis of peptide bonds.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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