CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0617400

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.2 Os02g0617400 AK108108.1 - Lipolytic enzyme, G-D-S-L family protein 1e-2 At3g04290 LTL1 (LI-TOLERANT LIPASE 1) S.X. H.G.
0.63 82.7 Os01g0753800 AK121555.1 - Conserved hypothetical protein 3e+0 At5g47640 NF-YB2 (NUCLEAR FACTOR Y, SUBUNIT B2) S.X. H.G.
0.50 68.0 Os06g0604000 AK061163.1 - Ethylene response factor 3 2e-10 At1g15360 SHN1 (SHINE 1) S.X. H.G.
0.50 68.0 Os11g0456000 AK121173.1 - Rapid ALkalinization Factor family protein 5e-3 At1g58420 - S.X. H.G.
0.50 68.0 Os01g0652000 NM_192389.1 - - 1e-3 At4g18570 proline-rich family protein S.X. H.G.
0.50 68.0 Os07g0565800 AK062834.1 - Conserved hypothetical protein 2e+0 At3g25577 unknown protein S.X. H.G.
0.48 63.7 Os01g0814100 AK061173.1 - Plant lipid transfer/seed storage/trypsin-alphaamylase inhibitor domain containing protein 5e-1 At2g14170 ALDH6B2 S.X. H.G.
0.38 46.9 Os03g0844600 AK108050.1 - Lipolytic enzyme, G-D-S-L family protein 5e-7 At3g26020 serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative S.X. H.G.
0.20 16.5 Os11g0558300 AK109777.1 - - 8e-11 At1g49430 LACS2 (LONG-CHAIN ACYL-COA SYNTHETASE 2) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
42.4 99.9 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
25.1 99.5 GSM159201 Inflorescence (P5, 15 - 22 cm), biological rep 1 GSE6893 Expression data for reproductive development in rice
20.1 99.1 GSM159202 Inflorescence (P5, 15 - 22 cm), biological rep 2 GSE6893 Expression data for reproductive development in rice
16.6 98.8 GSM429984 Rice wild-type panicle rep2 GSE17194 Genome-wide gene expression profiling of rice Indica cultivar Zhongxian 3037 and mutant phoenix (pho) panicle
13.7 98.5 GSM99878 TCHW P20_ir29 control, biological rep2 GSE4438 Expression data from rice under salinity stress
12.5 98.3 GSM159203 Inflorescence (P5, 15 - 22 cm), biological rep 3 GSE6893 Expression data for reproductive development in rice
12.4 98.3 GSM99877 TCHW P19_ir29 control, biological rep1 GSE4438 Expression data from rice under salinity stress
12.3 98.3 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
12.1 98.3 GSM99881 TCHW P23_ir29 salt stress, biological rep2 GSE4438 Expression data from rice under salinity stress
11.9 98.3 GSM99873 TCHW P16_agami salt stress, biological rep1 GSE4438 Expression data from rice under salinity stress
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.45 2e-70 268 Os04g0507700 AK121383.1 - Lipolytic enzyme, G-D-S-L family protein 6e-5 At5g33370 GDSL-motif lipase/hydrolase family protein C.G. S.X.
0.44 6e-86 319 Os10g0463200 AK108201.1 - Lipolytic enzyme, G-D-S-L family protein 1e-5 At4g28780 GDSL-motif lipase/hydrolase family protein C.G. S.X.
0.35 2e-55 218 Os02g0816200 AK060243.1 - Lipolytic enzyme, G-D-S-L family protein 2e-4 At3g04290 LTL1 (LI-TOLERANT LIPASE 1) C.G. S.X.
0.23 1e-31 139 Os08g0565900 AK106778.1 - Lipolytic enzyme, G-D-S-L family protein 2e-1 At5g33370 GDSL-motif lipase/hydrolase family protein C.G. S.X.
0.06 9e-11 69 Os01g0728100 AK070946.1 - Lipolytic enzyme, G-D-S-L family protein 1e-3 At1g29660 GDSL-motif lipase/hydrolase family protein C.G. S.X.
0.04 2e-8 61 Os09g0540400 AK111927.1 - Family II lipase EXL3 2e-1 At5g18430 GDSL-motif lipase/hydrolase family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 1e-2 42 Arabidopsis thaliana At3g04290 819584 LTL1 (LI-TOLERANT LIPASE 1) F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM - - - C.G. S.X.
0.07 1e-3 46 Glycine max GmaAffx.80770.1.S1_at AI416771 - - 1e-7 At5g33370 GDSL-motif lipase/hydrolase family protein C.G. S.X.
0.50 9e-119 426 Hordeum vulgare Contig3996_at Contig3996 - - 2e-4 At4g28780 GDSL-motif lipase/hydrolase family protein C.G. S.X.
0.10 2e-1 38 Populus trichocarpa PtpAffx.80849.1.S1_at CN519964 hypothetical protein - 3e-5 At4g28780 GDSL-motif lipase/hydrolase family protein C.G. S.X.
0.44 6e-66 252 Triticum aestivum Ta.10042.1.S1_at CK205237 - - 2e-4 At4g28780 GDSL-motif lipase/hydrolase family protein C.G. S.X.
0.17 2e-7 56 Vitis vinifera 1607785_at CF607746 hypothetical protein LOC100260283 - 3e-7 At3g04290 LTL1 (LI-TOLERANT LIPASE 1) C.G. S.X.
0.68 0 1231 Zea mays Zm.17169.1.S1_at CO532055 hypothetical protein LOC100280267 - 3e-3 At4g28780 GDSL-motif lipase/hydrolase family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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