CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0615400

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.38 46.9 Os02g0615400 9630.m03879 - Leucine-rich repeat, plant specific containingprotein 2e+0 At1g25370 unknown protein S.X. H.G.
0.16 11.3 Os09g0304800 CB681576 - Conserved hypothetical protein 2e+0 At4g35320 unknown protein S.X. H.G.
0.05 2.5 Os09g0380600 AK063655.1 - Conserved hypothetical protein 1e+1 At5g67070 RALFL34 (ralf-like 34) S.X. H.G.
0.04 2.0 Os09g0354900 AK069410.1 - Conserved hypothetical protein 1e-2 At3g50550 unknown protein S.X. H.G.
0.04 2.0 Os07g0541700 AK105128.1 - Receptor-like protein kinase 5 5e-4 At4g23260 ATP binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase S.X. H.G.
0.03 1.4 Os11g0626700 AK120168.1 - Hypothetical protein 1e+1 At5g05500 pollen Ole e 1 allergen and extensin family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
92.1 100.0 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
29.8 99.7 GSM421698 XOO, 8 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
27.2 99.6 GSM375777 slr1 (k1001)_ shoot_replicate 3 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
25.6 99.5 GSM375773 slr1 (k1001)_ shoot_replicate 1 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
22.0 99.3 GSM375775 slr1 (k1001)_ shoot_replicate 2 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
19.8 99.1 GSM421678 XOC, 8 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
11.4 98.2 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.2 98.2 GSM154960 Leaf_OsRR6-overexpressor_replicate 2 GSE6720 Gene expression in OsRR6-overexpression line
10.5 98.1 GSM421715 MOCK, 8 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
10.2 98.0 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 1e-3 46 Os02g0615500 AK100073.1 - Protein kinase domain containing protein 1e-1 At2g01918 calcium ion binding C.G. S.X.
0.02 9e-1 36 Os05g0451200 AK073037.1 - Hypothetical protein 4e-5 At2g38060 PHT4 C.G. S.X.
0.01 6e-2 40 Os10g0532100 AK065403.1 - Adrenodoxin reductase family protein 2e-21 At4g16310 LDL3 (LSD1-LIKE3) C.G. S.X.
0.01 2e-1 38 Os11g0172100 BU672886 - Pectinesterase family protein 1e+0 At3g19600 phosphoprotein phosphatase C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e+0 34 Arabidopsis thaliana At1g25370 839122 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM - - - C.G. S.X.
0.03 6e-1 36 Glycine max GmaAffx.72168.1.A1_at BE821577 - - 7e-1 At1g69818 - C.G. S.X.
0.02 3e+0 32 Hordeum vulgare Contig20754_at Contig20754 - - 5e+0 At5g41960 unknown protein C.G. S.X.
0.03 6e-1 36 Populus trichocarpa PtpAffx.225218.1.S1_at pmrna44401 hypothetical protein - 8e-2 At1g68870 unknown protein C.G. S.X.
0.03 7e+0 32 Triticum aestivum TaAffx.95234.1.A1_at BE516020 - - 2e-1 At5g15310 ATMYB16 (MYB DOMAIN PROTEIN 16) C.G. S.X.
0.02 1e-1 36 Vitis vinifera 1621970_at CD713131 hypothetical protein LOC100243642 - 9e-2 At3g58210 meprin and TRAF homology domain-containing protein / MATH domain-containing protein C.G. S.X.
0.02 8e-1 34 Zea mays ZmAffx.1360.1.S1_at 40794996-48 - - 1e+0 At5g44650 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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