CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0603500

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.2 Os02g0603500 NM_186455.1 - - 3e-3 At1g31070 UDP-N-acetylglucosamine pyrophosphorylase-related S.X. H.G.
0.83 95.8 Os09g0528300 AK121125.1 - Conserved hypothetical protein 1e-1 At1g26665 - S.X. H.G.
0.71 89.6 Os11g0673900 9639.m04180 - NBS-LRR type resistance protein (Fragment) 1e+0 At4g16210 ECHIA (ENOYL-COA HYDRATASE/ISOMERASE A) S.X. H.G.
0.71 89.6 Os12g0425200 9640.m02256 - - 5e+0 At5g04440 unknown protein S.X. H.G.
0.67 87.2 Os06g0169933 9634.m00659 - - 1e-2 At4g25410 DNA binding / transcription factor S.X. H.G.
0.67 87.2 Os04g0201900 9632.m01129 - Curculin-like (mannose-binding) lectin domaincontaining protein 1e-1 At4g02630 protein kinase family protein S.X. H.G.
0.59 78.0 Os10g0375400 NM_196148.1 - - 4e+0 At5g49450 AtbZIP1 (Arabidopsis thaliana basic leucine-zipper 1) S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
69.2 99.9 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
45.5 99.9 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
33.0 99.8 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
31.0 99.7 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.6 99.5 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.9 99.5 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.1 99.3 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.4 99.1 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.4 99.0 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.1 98.9 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.66 0 1253 Os07g0165300 9635.m00651 - - 2e-3 At1g31070 UDP-N-acetylglucosamine pyrophosphorylase-related C.G. S.X.
0.18 4e-78 293 Os04g0208600 AK100900.1 - Cyclin-like F-box domain containing protein 6e-2 At1g59590 ZCF37 C.G. S.X.
0.15 1e-59 232 Os02g0297100 9630.m01857 - - 3e-2 At2g28160 FRU (FER-LIKE REGULATOR OF IRON UPTAKE) C.G. S.X.
0.11 6e-31 137 Os04g0208500 AK106410.1 - Cyclin-like F-box domain containing protein 4e+0 At4g35280 zinc finger (C2H2 type) family protein C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 3e-3 44 Arabidopsis thaliana At1g31070 839993 UDP-N-acetylglucosamine pyrophosphorylase-related F:nucleotidyltransferase activity;P:peptidoglycan biosynthetic process, metabolic process, UDP-N-acetylgalactosamine biosynthetic process;C:plasma membrane;MBFPO - - - C.G. S.X.
0.02 7e-2 40 Glycine max PsAffx.C53000079_at PsAffx.C53000079 - - 5e+0 At5g66350 SHI (SHORT INTERNODES) C.G. S.X.
0.02 2e-3 44 Hordeum vulgare Contig1762_s_at Contig1762 - - 4e-1 At1g28330 DYL1 (DORMANCY-ASSOCIATED PROTEIN-LIKE 1) C.G. S.X.
0.03 5e-3 44 Populus trichocarpa PtpAffx.43837.1.A1_s_at CV256587 hypothetical protein - 3e-6 At4g24026 unknown protein C.G. S.X.
0.07 9e-10 65 Triticum aestivum TaAffx.64983.1.S1_at BJ267703 - - 3e-1 At1g02405 proline-rich family protein C.G. S.X.
0.02 6e-2 38 Vitis vinifera 1616200_at CF568887 - - 4e-28 At3g09200 60S acidic ribosomal protein P0 (RPP0B) C.G. S.X.
0.03 9e-2 38 Zea mays Zm.13588.1.S1_at CD568500 - - 1e+0 At4g34670 40S ribosomal protein S3A (RPS3aB) C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage