CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0597300

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os02g0597300 AK064487.1 - Hypothetical protein 1e+0 At1g24200 paired amphipathic helix repeat-containing protein S.X. H.G.
0.80 94.6 Os09g0517100 AK100778.1 - Disease resistance protein family protein 5e-1 At1g75550 glycine-rich protein S.X. H.G.
0.67 87.2 Os04g0586500 AK106447.1 - Conserved hypothetical protein 4e+0 At3g51550 FER (FERONIA) S.X. H.G.
0.53 71.3 Os01g0768100 AK119989.1 - Hypothetical protein 2e+0 At2g45070 SEC61 BETA S.X. H.G.
0.42 53.9 Os04g0412300 AK110902.1 - Glycoside hydrolase, family 17 protein 3e+0 At5g42100 ATBG_PAP S.X. H.G.
0.38 46.9 Os04g0447100 9632.m03516 - Lipoxygenase 2e-5 At1g72520 lipoxygenase, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
40.0 99.9 GSM375767 gid1-3_ shoot_replicate 3 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
35.4 99.8 GSM375765 gid1-3_ shoot_replicate 1 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
30.3 99.7 GSM375766 gid1-3_ shoot_replicate 2 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
14.3 98.6 GSM375773 slr1 (k1001)_ shoot_replicate 1 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
13.5 98.5 GSM154946 Leaf_DMSO-treatment_30min_replicate 2 GSE6719 Cytokinin responsive genes in rice
12.9 98.4 GSM375775 slr1 (k1001)_ shoot_replicate 2 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
12.8 98.4 GSM375777 slr1 (k1001)_ shoot_replicate 3 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
11.1 98.2 GSM154951 Leaf_DMSO-treatment_120min_replicate 1 GSE6719 Cytokinin responsive genes in rice
11.0 98.2 GSM154945 Leaf_DMSO-treatment_30min_replicate 1 GSE6719 Cytokinin responsive genes in rice
10.5 98.1 GSM154947 Leaf_DMSO-treatment_30min_replicate 3 GSE6719 Cytokinin responsive genes in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 8e-19 97 Os02g0154100 AK106847.1 - Hypothetical protein 9e-1 At4g18580 unknown protein C.G. S.X.
0.01 6e-1 38 Os02g0625300 BU673008 - Phosphoenolpyruvate carboxylase kinase 4e+0 At5g43066 unknown protein C.G. S.X.
0.01 6e-1 38 Os04g0219800 AK062423.1 - Hypothetical protein 9e-1 At2g21200 auxin-responsive protein, putative C.G. S.X.
0.01 6e-1 38 Os11g0211300 AK072173.1 - NBS-LRR disease resistance protein homologue(Fragment) 4e+0 At4g21010 transcription initiation factor-related C.G. S.X.
0.01 2e+0 36 Os02g0281200 AK063172.1 - Disease resistance protein family protein 5e-1 At2g33630 3-beta hydroxysteroid dehydrogenase/isomerase family protein C.G. S.X.
0.01 2e+0 36 Os02g0282000 9630.m01703 - Disease resistance protein family protein 2e+0 At2g21900 WRKY59 C.G. S.X.
0.01 2e+0 36 Os03g0412200 AK061834.1 - Conserved hypothetical protein 2e+0 At5g39650 unknown protein C.G. S.X.
0.01 2e+0 36 Os10g0394400 AK062938.1 - Leucine-rich repeat, typical subtype containingprotein 6e-1 At5g56200 zinc finger (C2H2 type) family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 1e+0 36 Arabidopsis thaliana At1g24200 839034 paired amphipathic helix repeat-containing protein F:molecular_function unknown;P:regulation of transcription, DNA-dependent;C:nucleus;MFPO - - - C.G. S.X.
0.01 2e+0 36 Glycine max HgAffx.8295.1.S1_at CB380206 - - 1e+0 At4g32260 ATP synthase family C.G. S.X.
0.01 2e+0 34 Hordeum vulgare Contig5621_at Contig5621 - - 3e-1 At3g08610 unknown protein C.G. S.X.
0.01 3e-5 52 Populus trichocarpa PtpAffx.219882.1.S1_at pmrna36038 hypothetical protein - 3e+0 At5g09750 HEC3 (HECATE 3) C.G. S.X.
0.01 1e+0 36 Triticum aestivum Ta.10362.3.A1_at CA654838 - - 4e+0 At4g03210 XTH9 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 9) C.G. S.X.
0.01 4e-1 36 Vitis vinifera 1620663_at CF607591 hypothetical protein LOC100248542 - 1e+0 At5g47200 ATRAB1A C.G. S.X.
0.02 8e+0 32 Zea mays ZmAffx.234.1.S1_at AI670246 - - 1e+1 At4g02770 PSAD-1 (photosystem I subunit D-1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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