CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0593500

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.2 Os02g0593500 AK067498.1 - - 6e-18 At3g26570 PHT2 S.X. H.G.
0.91 98.9 Os01g0938100 CB680541 - Photosystem II protein PsbW, class I familyprotein 2e+0 At3g44950 glycine-rich protein S.X. H.G.
0.91 98.9 Os01g0866400 BU667041 - Fructose-1,6-bisphosphatase (EC 3.1.3.11)(Fragment) 8e-38 At1g43670 fructose-1,6-bisphosphatase, putative / D-fructose-1,6-bisphosphate 1-phosphohydrolase, putative / FBPase, putative S.X. H.G.
0.73 91.1 Os02g0285800 AK099035.1 - GTP-binding protein TypA family protein 4e-62 At5g13650 elongation factor family protein S.X. H.G.
0.63 82.7 Os08g0566600 AK066210.1 - Conserved hypothetical protein 3e-2 At2g05620 PGR5 (proton gradient regulation 5) S.X. H.G.
0.60 79.7 Os11g0432400 AK068090.1 - 2-oxoglutarate/malate translocator 2e-13 At5g19760 dicarboxylate/tricarboxylate carrier (DTC) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
9.4 97.9 GSM174887 D FR13 3 dpi rep 2 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
9.3 97.9 GSM421701 XOO, 24 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
8.9 97.8 GSM421679 XOC, 24 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
8.8 97.8 GSM421719 MOCK, 24 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
8.6 97.8 GSM421702 XOO, 24 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
8.1 97.7 GSM421722 MOCK, 24 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
7.9 97.6 GSM421723 MOCK, 96 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
7.9 97.6 GSM174883 A mock 3 dpi rep 1 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
7.8 97.6 GSM174885 B FR13 3 dpi rep 1 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
7.8 97.6 GSM421700 XOO, 24 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.28 0 1612 Os02g0593400 AK109015.1 - Conserved hypothetical protein 5e-1 At4g26290 unknown protein C.G. S.X.
0.01 9e-3 44 Os05g0114500 9633.m00159 - RNA-binding region RNP-1 (RNA recognition motif)domain containing protein 2e-1 At5g18362 unknown protein C.G. S.X.
0.01 4e-2 42 Os01g0118400 CB646265 - HGA6 3e-4 At3g18170 transferase, transferring glycosyl groups C.G. S.X.
0.01 4e-2 42 Os09g0343500 AK061057.1 - Protein of unknown function DUF1263 domaincontaining protein 4e+0 At4g29033 - C.G. S.X.
0.01 1e-1 40 Os01g0859400 AK072832.1 - Dual specificity protein phosphatase familyprotein 1e-1 At5g65210 TGA1 C.G. S.X.
0.01 1e-1 40 Os10g0377800 AK099380.1 - Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5) 4e-3 At5g49970 ATPPOX (A. THALIANA PYRIDOXIN (PYRODOXAMINE) 5'-PHOSPHATE OXIDASE) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.17 6e-18 93 Arabidopsis thaliana At3g26570 822265 PHT2 low affinity phosphate transporter - - - C.G. S.X.
0.07 3e-2 42 Glycine max GmaAffx.59308.1.S1_at BI427674 - - 1e+0 At1g51000 unknown protein C.G. S.X.
0.43 0 848 Hordeum vulgare Contig12263_at Contig12263 - - 2e-16 At3g26570 PHT2 C.G. S.X.
0.36 4e-35 151 Populus trichocarpa PtpAffx.208671.1.S1_at pmrna17204 hypothetical protein - 1e-42 At3g26570 PHT2 C.G. S.X.
0.61 0 1487 Triticum aestivum Ta.4001.1.S1_at AY293827.1 phosphate transporter 2-1 - 6e-12 At3g26570 PHT2 C.G. S.X.
0.13 1e-13 77 Vitis vinifera 1620639_at CA817351 hypothetical protein LOC100247658 - 3e-1 At1g10455 unknown protein C.G. S.X.
0.01 5e-1 36 Zea mays Zm.4377.2.A1_a_at AI714705 hypothetical protein LOC100193789 /// ubiquitin-conjugating enzyme E2 J2 - 2e-4 At1g17280 UBC34 (ubiquitin-conjugating enzyme 34) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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