CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0591700

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.78 93.4 Os02g0591700 AK072777.1 - Ribosomal protein L6 (Fragment) 9e-6 At1g74060 60S ribosomal protein L6 (RPL6B) S.X. H.G.
0.78 93.4 Os03g0807800 AK064984.1 - 40S ribosomal protein S2 2e-16 At3g57490 40S ribosomal protein S2 (RPS2D) S.X. H.G.
0.77 93.1 Os02g0814700 AK121994.1 - 60S ribosomal protein L17 [Oryza sativa (japonicacultivar-group)] 4e-78 At1g04480 60S ribosomal protein L23 (RPL23A) S.X. H.G.
0.76 92.2 Os05g0155100 AK120877.1 - 60S ribosomal protein L18 5e-4 At2g47570 60S ribosomal protein L18 (RPL18A) S.X. H.G.
0.75 91.9 Os07g0150200 AK121635.1 - 40S ribosomal protein S12 5e-19 At2g32060 40S ribosomal protein S12 (RPS12C) S.X. H.G.
0.74 91.4 Os03g0577000 AK061051.1 - 40S ribosomal protein S3 8e-31 At5g35530 40S ribosomal protein S3 (RPS3C) S.X. H.G.
0.73 91.1 Os10g0170200 AK121628.1 - Ribosomal protein S10 family protein 4e-16 At5g62300 40S ribosomal protein S20 (RPS20C) S.X. H.G.
0.72 89.8 Os11g0127900 L36313.1 - 40S ribosomal protein S16 2e-9 At3g04230 40S ribosomal protein S16 (RPS16B) S.X. H.G.
0.71 89.6 Os03g0343500 AB117995.1 - 60S ribosomal protein L22-2 2e-24 At3g05560 60S ribosomal protein L22-2 (RPL22B) S.X. H.G.
0.71 89.6 Os01g0815800 AK058612.1 - - 2e-31 At3g53020 STV1 (SHORT VALVE1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
5.8 97.0 GSM275411 Azucena root tip_Buckled at the wax layer_rep1 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
4.3 96.1 GSM275414 Azucena root tip_Before the wax layer_rep1 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
4.2 96.0 GSM275405 Azucena root tip_At the wax layer_rep1 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
3.9 95.8 GSM275407 Azucena root tip_At the wax layer_rep3 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
3.8 95.7 GSM275412 Azucena root tip Buckled at the wax layer_rep2 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
3.5 95.3 GSM275406 Azucena root tip_At the wax layer_rep2 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
3.5 95.3 GSM275408 Bala root tip_At the wax layer_rep1 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
3.4 95.2 GSM275416 Azucena root tip_Before the wax layer_Rep3 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
3.4 95.2 GSM275413 Azucena root tip_Buckled at the wax layer_rep3 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
3.1 94.8 GSM275415 Azucena root tip_Before the wax layer_Rep2 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.53 5e-160 565 Os04g0473400 AK067896.1 - 60S ribosomal protein L6 2e-6 At1g74050 60S ribosomal protein L6 (RPL6C) C.G. S.X.
0.02 6e-2 40 Os01g0208000 AK108020.1 - Hypothetical protein 2e-1 At3g58850 PAR2 (PHY RAPIDLY REGULATED 2) C.G. S.X.
0.02 1e+0 36 Os10g0116700 NM_194611.1 - - 4e+0 At4g13180 short-chain dehydrogenase/reductase (SDR) family protein C.G. S.X.
0.01 3e-1 38 Os10g0546300 AK103033.1 - Conserved hypothetical protein 1e-13 At2g27900 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.10 9e-6 52 Arabidopsis thaliana At1g74060 843746 60S ribosomal protein L6 (RPL6B) F:structural constituent of ribosome;P:translation;C:cytosolic ribosome, cytosolic large ribosomal subunit, ribosome, nucleolus, intracellular;MOFPA - - - C.G. S.X.
0.09 2e-16 87 Glycine max Gma.10826.4.S1_at AI442855 - - 5e-35 At1g74050 60S ribosomal protein L6 (RPL6C) C.G. S.X.
0.58 5e-135 480 Hordeum vulgare Contig1243_at Contig1243 - - 1e-1 At1g74060 60S ribosomal protein L6 (RPL6B) C.G. S.X.
0.13 5e-11 69 Populus trichocarpa PtpAffx.549.1.A1_s_at CV247729 hypothetical protein - 1e-31 At1g74050 60S ribosomal protein L6 (RPL6C) C.G. S.X.
0.50 2e-117 422 Triticum aestivum Ta.28291.1.S1_at BJ318276 Ribosomal protein L6 - 2e-1 At1g74050 60S ribosomal protein L6 (RPL6C) C.G. S.X.
0.11 4e-8 57 Vitis vinifera 1621076_at CF207338 hypothetical protein LOC100257150 - 6e-16 At1g74050 60S ribosomal protein L6 (RPL6C) C.G. S.X.
0.50 4e-129 460 Zea mays Zm.14473.2.A1_at CK347999 hypothetical protein LOC100191612 - 8e-3 At1g74060 60S ribosomal protein L6 (RPL6B) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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