CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0590800

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.50 68.0 Os02g0590800 AK060204.1 - Protein kinase domain containing protein 1e-12 At3g20860 ATNEK5 (NIMA-RELATED KINASE5) S.X. H.G.
0.40 51.1 Os08g0129700 AB099292.1 - NAD-dependent epimerase/dehydratase family protein 7e-14 At1g30620 MUR4 (MURUS 4) S.X. H.G.
0.31 34.5 Os01g0675500 AK069674.1 - Glycoprotein-specificUDP-glucuronyltransferase-like protein 8e-5 At1g27600 glycosyl transferase family 43 protein S.X. H.G.
0.29 31.1 Os06g0607000 AK121115.1 - Beta-1,3-glucanase-like protein 1e-3 At2g26600 glycosyl hydrolase family 17 protein S.X. H.G.
0.25 24.1 Os02g0637700 AK073849.1 - Zinc-containing alcohol dehydrogenase superfamilyprotein 6e-11 At5g24760 alcohol dehydrogenase, putative S.X. H.G.
0.11 6.5 Os04g0433600 AK073390.1 - Protein of unknown function DUF668 family protein 3e-1 At5g08660 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.6 96.3 GSM281586 Rice mutant dst, biological rep1 GSE11175 Comparison of transcriptome profile between wild-type and dst mutant plants
4.5 96.3 GSM281584 Rice Zhonghua11, biological rep2 GSE11175 Comparison of transcriptome profile between wild-type and dst mutant plants
4.4 96.2 GSM281585 Rice Zhonghua11, biological rep3 GSE11175 Comparison of transcriptome profile between wild-type and dst mutant plants
4.0 95.9 GSM304646 Unstable transgenic line (1) GSE12069 Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
4.0 95.9 GSM159202 Inflorescence (P5, 15 - 22 cm), biological rep 2 GSE6893 Expression data for reproductive development in rice
3.8 95.7 GSM159201 Inflorescence (P5, 15 - 22 cm), biological rep 1 GSE6893 Expression data for reproductive development in rice
3.7 95.6 GSM281587 Rice mutant dst, biological rep2 GSE11175 Comparison of transcriptome profile between wild-type and dst mutant plants
3.5 95.3 GSM159203 Inflorescence (P5, 15 - 22 cm), biological rep 3 GSE6893 Expression data for reproductive development in rice
3.4 95.2 GSM421703 XOO, 96 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
3.3 95.1 GSM421726 MOCK, 96 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.32 0 2193 Os02g0590700 AK100917.1 - Conserved hypothetical protein 4e-2 At3g20860 ATNEK5 (NIMA-RELATED KINASE5) C.G. S.X.
0.26 0 700 Os01g0754000 AK063730.1 - Conserved hypothetical protein 5e-3 At2g20585 NFD6 (NUCLEAR FUSION DEFECTIVE 6) C.G. S.X.
0.23 0 714 Os02g0267000 AK067325.1 - Chloroplast thylakoidal processing peptidase(Putative signal peptidase I) 3e-6 At3g24590 PLSP1 (plastidic type I signal peptidase 1) C.G. S.X.
0.21 0 718 Os07g0143200 AK060245.1 - Basic helix-loop-helix dimerisation region bHLHdomain containing protein 2e-1 At3g59060 PIL6 (PHYTOCHROME INTERACTING FACTOR 3-LIKE 6) C.G. S.X.
0.05 2e-34 149 Os01g0509400 AK111146.1 - Hypothetical protein 2e+0 At2g43140 DNA binding / transcription factor C.G. S.X.
0.03 2e-12 75 Os10g0450800 AK070851.1 - Glycine-rich cell wall structural protein 2precursor 1e-3 At2g05540 glycine-rich protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 1e-12 75 Arabidopsis thaliana At3g20860 821634 ATNEK5 (NIMA-RELATED KINASE5) Encodes a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. - - - C.G. S.X.
0.29 4e-164 579 Glycine max GmaAffx.43343.2.S1_at BI945998 - - 2e+0 At4g27130 eukaryotic translation initiation factor SUI1, putative C.G. S.X.
0.40 9e-129 460 Hordeum vulgare Contig9144_at Contig9144 - - 1e-15 At3g20860 ATNEK5 (NIMA-RELATED KINASE5) C.G. S.X.
0.20 2e-156 553 Populus trichocarpa PtpAffx.250004.1.S1_at 13936324-1 - - 1e+0 At2g32785 - C.G. S.X.
0.39 9e-103 375 Triticum aestivum Ta.6856.1.S1_at BT009517.1 - - 2e-4 At3g20860 ATNEK5 (NIMA-RELATED KINASE5) C.G. S.X.
0.22 4e-99 361 Vitis vinifera 1616890_x_at CF202744.1 - - 1e+1 At5g40700 unknown protein C.G. S.X.
0.20 0 694 Zea mays ZmAffx.1221.1.S1_at 11990232-113 - - 1e+0 At1g07140 SIRANBP C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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