CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0578000

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.77 93.1 Os02g0578000 AK064085.1 - Conserved hypothetical protein 1e-11 At1g78270 AtUGT85A4 (UDP-glucosyl transferase 85A4) S.X. H.G.
0.60 79.7 Os07g0184600 9635.m00824 - Conserved hypothetical protein 9e+0 At1g53785 unknown protein S.X. H.G.
0.57 77.0 Os01g0271901 NM_188063.1 - - 4e+0 At3g25905 CLE27 (CLAVATA3/ESR-RELATED 27) S.X. H.G.
0.42 53.9 Os01g0330800 NM_183865.1 - - 2e+0 At5g23070 thymidine kinase, putative S.X. H.G.
0.38 46.9 Os08g0253700 9636.m01545 - - 5e-1 At2g20080 unknown protein S.X. H.G.
0.38 46.9 Os05g0385100 9633.m02926 - - 8e-2 At2g17600 DC1 domain-containing protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
139.3 100.0 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
57.4 99.9 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
26.2 99.5 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.6 99.0 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.6 98.9 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.8 98.8 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.9 98.7 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.5 98.6 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.6 98.5 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.5 98.5 GSM377079 Genomic DNA - 45 day old leaf sample - mutant g6686 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.32 1e-31 139 Os04g0324000 AK106366.1 - - 3e-12 At1g78270 AtUGT85A4 (UDP-glucosyl transferase 85A4) C.G. S.X.
0.25 5e-99 363 Os04g0451200 AK068176.1 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 2e-1 At1g22360 AtUGT85A2 (UDP-glucosyl transferase 85A2) C.G. S.X.
0.17 3e-122 440 Os02g0578300 AK105275.1 - - 2e-7 At1g22400 UGT85A1 C.G. S.X.
0.12 2e-46 188 Os02g0755900 AK104985.1 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 8e-1 At1g22340 AtUGT85A7 (UDP-glucosyl transferase 85A7) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e-11 71 Arabidopsis thaliana At1g78270 844162 AtUGT85A4 (UDP-glucosyl transferase 85A4) F:transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, glucuronosyltransferase activity;P:metabolic process;C:cellular_component unknown;PMVBFO - - - C.G. S.X.
0.04 3e-7 57 Glycine max GmaAffx.47330.1.S1_at BU926438 - - 2e-1 At4g09840 unknown protein C.G. S.X.
0.26 1e-68 260 Hordeum vulgare Contig11709_at Contig11709 - - 3e-3 At1g22360 AtUGT85A2 (UDP-glucosyl transferase 85A2) C.G. S.X.
0.02 3e-1 38 Populus trichocarpa PtpAffx.135263.1.S1_s_at BU823432 hypothetical protein - 2e-1 At2g29300 tropinone reductase, putative / tropine dehydrogenase, putative C.G. S.X.
0.27 1e-85 317 Triticum aestivum Ta.8495.1.A1_at BJ250503 - - 8e-4 At5g66350 SHI (SHORT INTERNODES) C.G. S.X.
0.05 2e-1 36 Vitis vinifera 1612277_at CF215260 hypothetical protein LOC100243794 - 1e-1 At4g32750 unknown protein C.G. S.X.
0.12 2e-24 113 Zea mays Zm.9570.1.A1_a_at BM337218 hypothetical protein LOC100279354 - 2e+1 Atcg00330 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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