CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0576600

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os02g0576600 AB091674.1 - Sucrose transporter 3e-1 At5g51210 OLEO3 (OLEOSIN3) S.X. H.G.
0.83 95.8 Os07g0685600 AK121312.1 - Conserved hypothetical protein 6e-37 At1g16820 vacuolar ATP synthase catalytic subunit-related / V-ATPase-related / vacuolar proton pump-related S.X. H.G.
0.77 93.1 Os11g0192400 AK100252.1 - Pectinesterase family protein 3e+0 At4g19160 unknown protein S.X. H.G.
0.73 91.1 Os08g0122900 9636.m00196 - Conserved hypothetical protein 2e+0 At5g09790 ATXR5 S.X. H.G.
0.61 81.2 Os12g0456700 AK119478.1 - Glycerophosphoryl diester phosphodiesterase familyprotein 3e+0 At5g52480 - S.X. H.G.
0.59 78.0 Os03g0215200 AY494713.1 - DL protein (Drooping leaf) 6e-7 At1g69180 CRC (CRABS CLAW) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
138.9 100.0 GSM195220 stigma 3, biological rep 2 GSE7951 Genome-wide gene expression profiling of rice stigma
128.7 100.0 GSM195219 stigma 2, biological rep 2 GSE7951 Genome-wide gene expression profiling of rice stigma
115.3 100.0 GSM195218 stigma 1, biological rep1 GSE7951 Genome-wide gene expression profiling of rice stigma
12.3 98.3 GSM195222 Ovary 2, biological rep 2 GSE7951 Genome-wide gene expression profiling of rice stigma
12.0 98.3 GSM195223 Ovary 3, biological rep 3 GSE7951 Genome-wide gene expression profiling of rice stigma
11.9 98.3 GSM195221 Ovary 1, biological rep 1 GSE7951 Genome-wide gene expression profiling of rice stigma
2.3 93.0 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
0.7 79.9 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
0.7 79.9 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
0.7 79.9 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 6e-13 77 Os10g0404500 AB071809.1 - Sucrose transporter 1e-2 At1g22710 SUC2 (SUCROSE-PROTON SYMPORTER 2) C.G. S.X.
0.04 9e-9 63 Os03g0170900 D87819.1 - Sucrose transporter 5e-6 At1g22710 SUC2 (SUCROSE-PROTON SYMPORTER 2) C.G. S.X.
0.03 2e-9 65 Os02g0827200 AB091673.1 - Sucrose transporter 1e-18 At2g02860 SUT2 (SUCROSE TRANSPORTER 2) C.G. S.X.
0.01 2e-3 46 Os11g0152700 AK102690.1 - Transcription factor HBP-1b(C38) (Fragment) 3e-1 At1g77920 bZIP family transcription factor C.G. S.X.
0.01 8e-3 44 Os05g0129700 AF050180.1 - Homeobox protein rough sheath 1 3e-10 At1g62360 STM (SHOOT MERISTEMLESS) C.G. S.X.
0.01 8e-3 44 Os05g0549100 AK072422.1 - Casein kinase II, alpha' chain (CK II) (EC2.7.1.37) 1e-27 At1g68830 STN7 (Stt7 homolog STN7) C.G. S.X.
0.01 1e-1 40 Os01g0112000 9629.m00127 - Conserved hypothetical protein 2e+0 At4g11870 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 3e-1 38 Arabidopsis thaliana At5g51210 835196 OLEO3 (OLEOSIN3) Encodes oleosin3, a protein found in oil bodies, involved in seed lipid accumulation. - - - C.G. S.X.
0.02 1e+0 36 Glycine max PsAffx.C46000079_at PsAffx.C46000079 - - 1e+0 At1g64100 pentatricopeptide (PPR) repeat-containing protein C.G. S.X.
0.26 2e-53 210 Hordeum vulgare Contig14939_at Contig14939 - - 7e+0 At5g66658 unknown protein C.G. S.X.
0.02 4e-1 38 Populus trichocarpa PtpAffx.44202.1.A1_at CV241343 - - 2e-2 At5g46780 VQ motif-containing protein C.G. S.X.
0.06 9e-20 99 Triticum aestivum Ta.3677.1.S1_at AF408844.1 sucrose transporter SUT1A - 5e+0 At5g43610 ATSUC6 (Sucrose-proton symporter 6) C.G. S.X.
0.02 3e-1 36 Vitis vinifera 1619139_at CB919812 hypothetical protein LOC100261695 - 5e-6 At1g04070 TOM22-I (TRANSLOCASE OF OUTER MEMBRANE 22-I) C.G. S.X.
0.10 4e-20 99 Zea mays Zm.10553.1.A1_at CD441187 - - 4e+0 At1g22710 SUC2 (SUCROSE-PROTON SYMPORTER 2) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006810 The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism.
L GO:0015770 The directed movement of sucrose into, out of, within or between cells. Sucrose is the disaccharide fructofuranosyl-glucopyranoside.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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