CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0574100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.84 96.0 Os02g0574100 AK068280.1 - General substrate transporter family protein 9e-1 At5g25940 early nodulin-related S.X. H.G.
0.62 81.5 Os10g0111300 CB638003 - TGF-beta receptor, type I/II extracellular regionfamily protein 1e-3 At1g69860 proton-dependent oligopeptide transport (POT) family protein S.X. H.G.
0.60 79.7 Os07g0628900 AK111564.1 - KI domain interacting kinase 1 8e-8 At4g21390 B120 S.X. H.G.
0.53 71.3 Os06g0476200 AK065566.1 - Phosphoglucomutase precursor (EC 5.4.2.2) 5e-2 At1g70820 phosphoglucomutase, putative / glucose phosphomutase, putative S.X. H.G.
0.51 68.7 Os06g0136600 AK069316.1 - Enolase 1 (EC 4.2.1.11) (2-phosphoglyceratedehydratase 1) (2-phospho- D-glycerate hydro-lyase 1) 9e-47 At2g36530 LOS2 S.X. H.G.
0.50 68.0 Os09g0548400 AK067622.1 - Conserved hypothetical protein 9e-1 At3g06540 GDP dissociation inhibitor family protein / Rab GTPase activator family protein S.X. H.G.
0.50 68.0 Os01g0221500 NM_188507.1 - - 6e-9 At2g46220 unknown protein S.X. H.G.
0.50 68.0 Os01g0673800 AK120641.1 - Conserved hypothetical protein 2e-3 At2g31040 ATP synthase protein I -related S.X. H.G.
0.49 64.4 Os03g0284900 AK068146.1 - Protein prenyltransferase domain containingprotein 6e-3 At5g02830 pentatricopeptide (PPR) repeat-containing protein S.X. H.G.
0.48 63.7 Os03g0586500 AK068097.1 - Conserved hypothetical protein 2e-1 At5g22550 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
17.0 98.8 GSM207562 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
17.0 98.8 GSM154948 Leaf_tZ-treatment_30min_replicate 1 GSE6719 Cytokinin responsive genes in rice
15.7 98.7 GSM207564 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
15.6 98.7 GSM154956 Leaf_tZ-treatment_120min_replicate 3 GSE6719 Cytokinin responsive genes in rice
15.5 98.7 GSM421715 MOCK, 8 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
14.4 98.6 GSM154950 Leaf_tZ-treatment_30min_replicate 3 GSE6719 Cytokinin responsive genes in rice
13.1 98.4 GSM154949 Leaf_tZ-treatment_30min_replicate 2 GSE6719 Cytokinin responsive genes in rice
11.7 98.2 GSM421675 XOC, 8 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
11.4 98.2 GSM154955 Leaf_tZ-treatment_120min_replicate 2 GSE6719 Cytokinin responsive genes in rice
11.3 98.2 GSM421695 XOO, 8 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.63 0 1170 Os02g0574000 AK099415.1 - Monosaccharide transporter 1 2e-1 At1g11260 STP1 (SUGAR TRANSPORTER 1) C.G. S.X.
0.54 1e-56 222 Os02g0573500 AK121678.1 - Monosaccharide transporter 1 2e-1 At4g21480 carbohydrate transmembrane transporter/ sugar:hydrogen symporter C.G. S.X.
0.14 1e-16 89 Os04g0454200 AK072059.1 - Monosaccharide transporter 1 6e-2 At1g34580 monosaccharide transporter, putative C.G. S.X.
0.14 9e-15 83 Os04g0453200 AK121306.1 - Monosaccharide transporter 1 7e-2 At1g34580 monosaccharide transporter, putative C.G. S.X.
0.09 9e-18 93 Os01g0567500 AK069327.1 - Monosaccharide transporter 3 1e-9 At1g11260 STP1 (SUGAR TRANSPORTER 1) C.G. S.X.
0.05 1e-16 89 Os02g0687900 AK064814.1 - Peptidase S10, serine carboxypeptidase familyprotein 4e-6 At3g12203 scpl17 (serine carboxypeptidase-like 17) C.G. S.X.
0.04 2e-19 99 Os01g0848200 CB633945 - Delta 1-pyrroline-5-carboxylate synthetase (P5CS)[Includes: Glutamate 5-kinase (EC 2.7.2.11)(Gamma-glutamyl kinase) (GK) 4e+0 At5g60805 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 9e-1 36 Arabidopsis thaliana At5g25940 832663 early nodulin-related F:molecular_function unknown;P:unknown;C:mitochondrion;P - - - C.G. S.X.
0.02 8e-2 40 Glycine max GmaAffx.84530.1.S1_at BU090645 - - 3e+0 At5g02930 F-box family protein C.G. S.X.
0.09 2e-3 44 Hordeum vulgare Contig13857_at Contig13857 - - 4e-2 At4g02050 sugar transporter, putative C.G. S.X.
0.02 1e+0 36 Populus trichocarpa PtpAffx.216265.1.S1_at pmrna30922 hypothetical protein - 1e+1 At5g11840 unknown protein C.G. S.X.
0.24 3e-19 97 Triticum aestivum TaAffx.65159.1.S1_at BJ258761 - - 4e+0 At5g01445 unknown protein C.G. S.X.
0.02 3e-1 36 Vitis vinifera 1616547_at BQ798895 hypothetical protein LOC100256265 - 5e-21 At5g23230 NIC2 (NICOTINAMIDASE 2) C.G. S.X.
0.09 4e-7 56 Zea mays Zm.13072.1.S1_at CD438321 hypothetical protein LOC100193044 - 7e+0 At5g12880 proline-rich family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006810 The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism.
L GO:0008643 The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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