Gene omics information

Query gene ID Os02g0572200
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9097.1Os02g0572200AK109591.1-Zn-finger, RING domain containing protein4e-2At2g21660CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2)S.X.H.G.
0.4660.9Os05g0581700AK108181.1--6e-1At1g01130unknown proteinS.X.H.G.
0.4051.1Os10g0472400AK121929.1-Eukaryotic protein of unknown function DUF862family protein6e-1At3g07090unknown proteinS.X.H.G.
0.3846.9Os11g0258900AK102638.1-Conserved hypothetical protein9e-1At5g38760unknown proteinS.X.H.G.
0.3644.0Os08g04557009636.m03564-Exo70 exocyst complex subunit family protein1e-2At5g50380ATEXO70F1 (exocyst subunit EXO70 family protein F1)S.X.H.G.
0.3440.0Os01g0830500NM_190440.1-Conserved hypothetical protein3e-3At1g54215proline-rich family proteinS.X.H.G.
0.3338.8Os01g0840900AK063699.1-Hypothetical protein2e-1At1g71090auxin efflux carrier family proteinS.X.H.G.
0.2931.1Os01g0825000AK121919.1-LOB domain protein 123e-24At2g30340LBD13 (LOB DOMAIN-CONTAINING PROTEIN 13)S.X.H.G.
0.2831.1Os03g0158700AK071242.1--9e+0At4g24060Dof-type zinc finger domain-containing proteinS.X.H.G.
0.2625.6Os08g0158800AK107200.1-Hypothetical protein2e-1At1g44191-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
36.399.8GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
31.999.7GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.799.5GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.899.5GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.099.3GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.999.3GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.699.3GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.699.1GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.299.0GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.899.0GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.331e-37159Os04g04503009632.m03550-RING finger protein 13 (C-RZF)6e-1At2g33510protein bindingC.G.S.X.
0.102e-1895Os08g04842009636.m03794-Zn-finger, RING domain containing protein7e-1At2g17420NTRA (NADPH-DEPENDENT THIOREDOXIN REDUCTASE A)C.G.S.X.
0.104e-1067Os03g03911009631.m02701--3e+0At3g03000calmodulin, putativeC.G.S.X.
0.093e-1791Os03g0188200AK058578.1-Zn-finger, RING domain containing protein2e+0At2g17055disease resistance protein-relatedC.G.S.X.
0.061e-965Os05g0596500AK070817.1-Zn-finger, RING domain containing protein7e-1At5g63480unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.054e-240Arabidopsis thalianaAt2g21660816705CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2)Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).---C.G.S.X.
0.056e-240Glycine maxGmaAffx.70634.1.S1_atBQ079384--4e-9At3g05200ATL6C.G.S.X.
0.101e-963Hordeum vulgareContig4110_s_atContig4110--5e-2At5g41400zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.064e-344Populus trichocarpaPtpAffx.224082.1.S1_x_atpmrna42319hypothetical protein-1e-2At5g61030GR-RBP3 (glycine-rich RNA-binding protein 3)C.G.S.X.
0.071e-242Triticum aestivumTaAffx.100645.1.S1_atCA689015--3e-2At5g41400zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.042e-136Vitis vinifera1618277_atCF568829hypothetical protein LOC100265689-3e-48At1g79530GAPCP-1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE OF PLASTID 1)C.G.S.X.
0.041e-344Zea maysZm.8149.1.A1_atCK369738seed specific protein Bn15D14A-5e+0At3g11200AL2 (ALFIN-LIKE 2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0016567The process by which one or more ubiquitin moieties are added to a protein.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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