CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0556800

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.63 82.7 Os02g0556800 AK100187.1 - Conserved hypothetical protein 3e-2 At1g04445 zinc finger (C2H2 type) family protein S.X. H.G.
0.71 89.6 Os11g0595200 AK106159.1 - PAP fibrillin family protein 4e-2 At3g23400 plastid-lipid associated protein PAP / fibrillin family protein S.X. H.G.
0.71 89.6 Os10g0419500 AK071316.1 - Acireductone dioxygenase, ARD family protein 2e-10 At5g43850 ARD4 S.X. H.G.
0.67 87.2 Os07g0656700 AU173917 - Protein of unknown function DUF1334 family protein 4e-11 At5g13720 - S.X. H.G.
0.67 87.2 Os03g0704100 AK070474.1 - PAP fibrillin family protein 2e+0 At1g35410 - S.X. H.G.
0.63 82.7 Os08g0114100 AK099560.1 - Conserved hypothetical protein 4e-27 At1g64680 unknown protein S.X. H.G.
0.55 73.7 Os07g0171100 AK066475.1 - TPR-like domain containing protein 2e-16 At1g55480 binding / protein binding S.X. H.G.
0.50 68.0 Os11g0242400 AK067025.1 - Rieske [2Fe-2S] region domain containing protein 1e-1 At1g71500 Rieske (2Fe-2S) domain-containing protein S.X. H.G.
0.47 62.3 Os01g0912700 AK068528.1 - Conserved hypothetical protein 1e-1 At2g01340 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
11.6 98.2 GSM174888 C mock 3 dpi rep 2 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
11.0 98.2 GSM421701 XOO, 24 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
10.6 98.1 GSM174887 D FR13 3 dpi rep 2 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
9.8 98.0 GSM421681 XOC, 24 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
9.6 97.9 GSM174883 A mock 3 dpi rep 1 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
9.0 97.8 GSM421723 MOCK, 96 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
8.8 97.8 GSM421679 XOC, 24 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
8.8 97.8 GSM421683 XOC, 96 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
8.2 97.7 GSM421721 MOCK, 24 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
8.1 97.7 GSM421719 MOCK, 24 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 4e-40 167 Os02g0556700 AK062454.1 - T-complex 11 family protein 5e+0 At5g02740 nucleotide binding C.G. S.X.
0.04 1e-3 46 Os08g0433300 9636.m03373 - Sialidase domain containing protein 6e-1 At1g52810 2-oxoglutarate-dependent dioxygenase-related C.G. S.X.
0.03 7e-5 50 Os01g0234900 NM_188653.1 - Ubiquitin ligase SINAT5 (EC 6.3.2.-) (Seven inabsentia homolog 5). Splice isoform 2 1e-38 At3g61790 seven in absentia (SINA) family protein C.G. S.X.
0.02 1e-3 46 Os01g0252700 9629.m01470 - Phospholipid/glycerol acyltransferase familyprotein 9e-1 At5g55570 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e-2 40 Arabidopsis thaliana At1g04445 839514 zinc finger (C2H2 type) family protein F:zinc ion binding, nucleic acid binding;P:biological_process unknown;C:intracellular;P - - - C.G. S.X.
0.04 5e-2 40 Glycine max GmaAffx.90539.1.S1_at CF806264 - - 4e-1 At3g15680 zinc finger (Ran-binding) family protein C.G. S.X.
0.31 4e-68 258 Hordeum vulgare Contig4774_s_at Contig4774 - - 8e+0 At5g62720 integral membrane HPP family protein C.G. S.X.
0.03 5e-2 40 Populus trichocarpa PtpAffx.207186.1.S1_at pmrna14257 hypothetical protein - 1e-2 At5g04190 PKS4 (phytochrome kinase substrate 4) C.G. S.X.
0.26 2e-74 280 Triticum aestivum Ta.645.1.S1_a_at CK212406 - - 9e+0 At2g28550 RAP2.7 (RELATED TO AP2.7) C.G. S.X.
0.04 2e+0 32 Vitis vinifera 1616577_at BQ792277 hypothetical protein LOC100261345 - 6e+0 At3g54620 BZIP25 (BASIC LEUCINE ZIPPER 25) C.G. S.X.
0.27 2e-72 272 Zea mays Zm.10811.2.S1_at BM079148 - - 8e+0 At4g14730 transmembrane protein-related C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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