Gene omics information

Query gene ID Os02g0550600
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9499.4Os02g0550600BM421724-Plant neutral invertase family protein3e+0At3g51810EM1 (LATE EMBRYOGENESIS ABUNDANT 1)S.X.H.G.
0.3644.0Os07g0584500AK067725.1-RNA-binding region RNP-1 (RNA recognition motif)domain containing protein3e-23At3g07810heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putativeS.X.H.G.
0.2524.1Os02g0198600AK067974.1-Peptidase aspartic family protein6e-42At3g13235ubiquitin family proteinS.X.H.G.
0.2016.5Os07g0632700AK060066.1-contains InterPro domain(s): IPR000348, IPR0090383e-2At2g03290protein transmembrane transporterS.X.H.G.
0.1915.1Os01g0103600AK059848.1-Emopamil-binding family protein5e-4At1g20050HYD1 (HYDRA1)S.X.H.G.
0.1611.3Os06g0724100AK066985.1-Zn-finger, FYVE type domain containing protein1e-3At1g20110zinc finger (FYVE type) family proteinS.X.H.G.
0.138.2Os06g0115100AK059160.1--4e+0At5g66005Expressed proteinS.X.H.G.
0.105.7Os01g0587000AK067605.1-Vacuolar ATP synthase subunit d (EC 3.6.3.14)(V-ATPase d subunit) (Vacuolar proton pump d subunit)(V-ATPase 41 KDa accessory protein) (DVA41)2e-75At3g28710H+-transporting two-sector ATPase, putativeS.X.H.G.
0.105.7Os05g0168700AK065618.1-Conserved hypothetical protein6e-42At1g06890transporter-relatedS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.597.7GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in Musa
6.797.3GSM275415Azucena root tip_Before the wax layer_Rep2GSE10857Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
5.796.9GSM149409Rice Azucena 0ppm Arsenate (Control) Rep3GSE4471Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
5.596.8GSM275410Bala root tip_At the wax layer_rep3GSE10857Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
5.396.7GSM275416Azucena root tip_Before the wax layer_Rep3GSE10857Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
5.196.6GSM275412Azucena root tip Buckled at the wax layer_rep2GSE10857Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
4.596.3GSM431927Root- -Fe+P biological rep1GSE17245Transcriptome analysis of iron and phosphorus interaction in rice seedlings
4.496.2GSM154941Root_DMSO-treatment_120min_replicate 3GSE6719Cytokinin responsive genes in rice
4.496.2GSM159179Root, 7-day-old Seedling, biological rep 3GSE6893Expression data for reproductive development in rice
4.396.1GSM275414Azucena root tip_Before the wax layer_rep1GSE10857Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.326e-109397Os04g0432400AK061496.1-Plant neutral invertase family protein2e-23At1g72000beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putativeC.G.S.X.
0.237e-47190Os11g0175400AK070884.1-Plant neutral invertase family protein2e-11At1g72000beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putativeC.G.S.X.
0.051e-554Os01g0332100AY187621.1-Plant neutral invertase family protein3e-17At5g22510beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putativeC.G.S.X.
0.031e-244Os04g04099009632.m03209-Plant neutral invertase family protein7e-48At5g22510beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putativeC.G.S.X.
0.036e+032Os03g02534009631.m01426-Transcription factor, MADS-box domain containingprotein1e+0At2g05335SCRL15 (SCR-Like 15)C.G.S.X.
0.036e+032Os05g05467009633.m04409--7e+0At4g38860auxin-responsive protein, putativeC.G.S.X.
0.022e+034Os10g0358700AK099994.1-TPR-like domain containing protein2e+0At1g29724protein bindingC.G.S.X.
0.026e+032Os05g0546800AK067522.1-Conserved hypothetical protein3e+0At4g16140proline-rich family proteinC.G.S.X.
0.013e-346Os04g03484009632.m02651-U box domain containing protein2e-4At3g07360PUB9 (PLANT U-BOX 9)C.G.S.X.
0.016e+032Os01g0707500AK109307.1-Transcription factor1e-1At2g28610PRS (PRESSED FLOWER)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.043e+032Arabidopsis thalianaAt3g51810824344EM1 (LATE EMBRYOGENESIS ABUNDANT 1)Encodes a ABA-inducible protein that accumulates during seed maturation, in parallel with its corresponding mRNA but with a 3 d delay. During germination, AtEm1 protein undergoes two successive cleavages before being degraded. Both proteins are more stable than the corresponding mRNA. The gene can be activated by the basic leucine zipper transcription factor ABI5. Expressed predominantly in provascular tissues with the strongest expression in the root tip.---C.G.S.X.
0.044e+032Glycine maxGmaAffx.91881.1.S1_s_atCF807606--3e-1At1g10140-C.G.S.X.
0.099e-236Hordeum vulgareHU05D16u_s_atHU05D16u--4e+0At4g11393-C.G.S.X.
0.051e+034Populus trichocarpaPtp.1051.2.A1_atCK090246--2e-1At5g60590yrdC protein-relatedC.G.S.X.
0.041e+130Triticum aestivumTaAffx.85787.1.S1_atCA619640--3e-1At1g68585unknown proteinC.G.S.X.
0.034e+030Vitis vinifera1613812_atCF405540hypothetical protein LOC100248707-4e+0At5g08505-C.G.S.X.
0.068e-236Zea maysZm.5062.1.A1_atAW288917hypothetical protein LOC100191591-6e-13At1g72000beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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