CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0529500

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os02g0529500 AK069978.1 - SNAP25-like protein C (Fragment) 1e-1 At3g48600 SWIB complex BAF60b domain-containing protein S.X. H.G.
0.60 79.7 Os02g0175700 AK069542.1 - ANTH domain containing protein 2e-11 At4g25940 epsin N-terminal homology (ENTH) domain-containing protein S.X. H.G.
0.46 60.9 Os07g0108500 AK071629.1 - C2 domain containing protein 4e-1 At4g21160 ZAC S.X. H.G.
0.44 58.1 Os12g0633400 AK100940.1 - Pathogenesis-related protein PR-1 precursor 8e-1 At2g36030 unknown protein S.X. H.G.
0.40 51.1 Os01g0356900 AK064742.1 - Extensin-like protein 9e-1 At1g03440 leucine-rich repeat family protein S.X. H.G.
0.32 36.3 Os04g0641200 AK100257.1 - Pectinesterase (EC 3.1.1.11) (Fragment) 4e-1 At2g47040 VGD1 (VANGUARD1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
356.9 100.0 GSM195227 Anther GSE7951 Genome-wide gene expression profiling of rice stigma
8.1 97.7 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.6 96.9 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.1 96.6 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.9 96.5 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
4.7 96.4 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.7 96.4 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.1 96.0 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.1 96.0 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
3.7 95.6 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 4e-16 87 Os02g0437200 AK065640.1 - SNAP-34 1e+0 At1g68760 ATNUDX1 (ARABIDOPSIS THALIANA NUDIX HYDROLASE 1) C.G. S.X.
0.06 5e-3 44 Os03g0212400 AK064327.1 - SNAP25 homologous protein SNAP33 (AtSNAP33)(Synaptosomal-associated protein SNAP25-like 1) (SNAP-25like protein 1) (Snap25a) 3e-3 At5g61210 SNAP33 (SOLUBLE N-ETHYLMALEIMIDE-SENSITIVE FACTOR ADAPTOR PROTEIN 33) C.G. S.X.
0.03 3e-1 38 Os10g0191650 9638.m01033 - - 4e+0 At1g74970 RPS9 (RIBOSOMAL PROTEIN S9) C.G. S.X.
0.03 1e+0 36 Os01g0220400 AK105221.1 - - 1e-2 At5g17523 - C.G. S.X.
0.02 5e-3 44 Os01g0254800 AK065568.1 - Hypothetical protein 3e+0 At3g59390 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 1e-1 38 Arabidopsis thaliana At3g48600 824020 SWIB complex BAF60b domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFOBVM - - - C.G. S.X.
0.02 8e-1 36 Glycine max PsAffx.CL522Contig1_s_at PsAffx.CL522Contig1 - - 3e-1 At3g17130 invertase/pectin methylesterase inhibitor family protein C.G. S.X.
0.08 5e-9 61 Hordeum vulgare Contig12026_at Contig12026 - - 3e-2 At4g32714 SCRL25 (SCR-Like 25) C.G. S.X.
0.03 2e-1 38 Populus trichocarpa PtpAffx.29726.1.A1_s_at CV249620 hypothetical protein - 1e-28 At1g13890 SNAP30 (SOLUBLE N-ETHYLMALEIMIDE-SENSITIVE FACTOR ADAPTOR PROTEIN 30) C.G. S.X.
0.39 1e-45 184 Triticum aestivum Ta.666.1.A1_at BE499016 - - 3e-1 At1g13890 SNAP30 (SOLUBLE N-ETHYLMALEIMIDE-SENSITIVE FACTOR ADAPTOR PROTEIN 30) C.G. S.X.
0.02 7e-1 34 Vitis vinifera 1620648_at CD008794 hypothetical protein LOC100256959 - 1e+0 At4g27380 unknown protein C.G. S.X.
0.23 9e-32 137 Zea mays Zm.3820.1.S1_at AW438235 - - 4e+0 At2g19740 60S ribosomal protein L31 (RPL31A) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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