Gene omics information

Query gene ID	Os02g0527700
Gene name
Organism	Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.53	71.3	Os02g0527700	AK069409.1	-	Conserved hypothetical protein	6e-1	At2g23340	AP2 domain-containing transcription factor, putative	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.57	77.0	Os11g0569100	9639.m03253	-	-	3e-1	At1g10140	-	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.40	51.1	Os09g0382800	9637.m01851	-	-	3e-4	At4g19710	bifunctional aspartate kinase/homoserine dehydrogenase, putative / AK-HSDH, putative	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.40	51.1	Os10g0379000	9638.m01982	-	-	6e-1	At5g60590	yrdC protein-related	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.38	46.9	Os06g0343700	9634.m02323	-	-	3e-2	At3g25190	nodulin, putative	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.36	44.0	Os02g0743900	9630.m05004	-	-	1e+0	At3g57670	NTT (NO TRANSMITTING TRACT)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.18	13.7	Os07g0262400	9635.m01586	-	-	3e-1	At3g43840	oxidoreductase, acting on the CH-CH group of donors	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
38.5	99.8	GSM422672	Drought	GSE16865	Heterologous microarrays for the study of drought stress in Musa
33.5	99.8	GSM377076	Genomic DNA - 45 day old leaf sample - mutant g6485	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
29.0	99.7	GSM377085	Genomic DNA - 45 day old leaf sample - mutant f2045	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.8	99.6	GSM377073	Genomic DNA - 45 day old leaf sample - mutant d2943	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.8	99.5	GSM377071	Genomic DNA - 45 day old leaf sample - mutant d256	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.2	99.3	GSM377070	Genomic DNA - 45 day old leaf sample - mutant d1	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.8	99.3	GSM377082	Genomic DNA - 45 day old leaf sample - mutant g9799	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.6	99.3	GSM377080	Genomic DNA - 45 day old leaf sample - mutant g6728	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.9	99.3	GSM377074	Genomic DNA - 45 day old leaf sample - mutant g282	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.0	99.2	GSM377077	Genomic DNA - 45 day old leaf sample - mutant g6489	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	9e-14	79	Os02g0319300	AK105036.1	-	Glutathione S-transferase, C-terminal-like domaincontaining protein	1e-13	At5g45020	-	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.04	2e-11	71	Os06g0303800	AK100772.1	-	Hypothetical protein	1e-1	At5g56170	-	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.03	9e-14	79	Os01g0530400	AK103724.1	-	Glutaredoxin-related protein family protein	2e+0	At5g67560	ATARLA1D (ADP-ribosylation factor-like A1D)	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.03	9e-14	79	Os02g0184100	AK073734.1	-	Conserved hypothetical protein	2e-3	At3g51880	HMGB1 (HIGH MOBILITY GROUP B 1)	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.03	2e-11	71	Os02g0807700	AK099623.1	-	Conserved hypothetical protein	3e+0	At4g10695	unknown protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.02	9e-14	79	Os09g0271000	AK102955.1	-	Conserved hypothetical protein	2e+0	At5g55890	unknown protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.02	2e-11	71	Os03g0644000	AK099664.1	-	Autophagy protein Apg6 family protein	1e-6	At3g61710	autophagy protein Apg6 family	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.01	8e-11	69	Os03g0348800	AK059731.1	-	Hypothetical protein	6e-4	At5g18630	lipase class 3 family protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	6e-1	36	Arabidopsis thaliana	At2g23340	816866	AP2 domain-containing transcription factor, putative	encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	8e-1	36	Glycine max	Gma.10897.1.S1_s_at	BM519569	-	-	6e-2	At1g07175	unknown protein	C.G.	S.X.	Please select
0.04	7e-2	38	Hordeum vulgare	Contig19500_at	Contig19500	-	-	7e+0	At5g09805	IDL3 (INFLORESCENCE DEFICIENT IN ABSCISSION (IDA)-LIKE 3)	C.G.	S.X.	Please select
0.03	5e-2	40	Populus trichocarpa	PtpAffx.209613.1.S1_at	pmrna19002	hypothetical protein	-	7e-1	At5g43570	serine-type endopeptidase inhibitor	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	2e-1	38	Triticum aestivum	TaAffx.3722.2.S1_s_at	CA594125	-	-	4e-3	At2g21060	ATGRP2B (GLYCINE-RICH PROTEIN 2B)	C.G.	S.X.	Please select
0.03	3e+0	32	Vitis vinifera	1619942_at	CF568925	-	-	3e+0	At3g57370	transcription factor IIB (TFIIB) family protein	C.G.	S.X.	Please select
0.02	3e-1	36	Zea mays	Zm.9219.1.A1_a_at	BM350438	hypothetical protein LOC100275751	-	3e-1	At1g77340	pentatricopeptide (PPR) repeat-containing protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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