CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0527200

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.82 95.0 Os02g0527200 AK058851.1 - Conserved hypothetical protein 5e-1 At1g07950 surfeit locus protein 5 family protein / SURF5 family protein S.X. H.G.
0.64 83.4 Os05g0540900 AK072284.1 - - 4e-2 At1g04445 zinc finger (C2H2 type) family protein S.X. H.G.
0.58 77.0 Os10g0392400 AK061602.1 - ZIM domain containing protein 5e-1 At5g56320 ATEXPA14 (ARABIDOPSIS THALIANA EXPANSIN A14) S.X. H.G.
0.57 77.0 Os01g0863300 AK111571.1 - Myb, DNA-binding domain containing protein 3e-2 At3g11280 myb family transcription factor S.X. H.G.
0.50 68.0 Os01g0135700 AK062711.1 - Flagellar calcium-binding protein (calflagin)family protein 6e-1 At1g76820 GTP binding / GTPase S.X. H.G.
0.49 64.4 Os03g0815100 AY596808.1 - OsNAC6 protein 7e-4 At1g01720 ATAF1 S.X. H.G.
0.48 63.7 Os02g0205500 AK067907.1 - Naringenin-chalcone synthase family protein 7e-5 At5g43760 KCS20 (3-KETOACYL-COA SYNTHASE 20) S.X. H.G.
0.43 55.4 Os01g0295700 AK070333.1 - Protein phosphatase-2C 5e-5 At2g33700 protein phosphatase 2C, putative / PP2C, putative S.X. H.G.
0.43 55.4 Os01g0884300 AK068392.1 - No apical meristem (NAM) protein domain containingprotein 7e-29 At1g01720 ATAF1 S.X. H.G.
0.42 53.9 Os06g0318800 AK062356.1 - Hypothetical protein 5e-3 At4g02235 AGL51 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
27.0 99.6 GSM159181 Mature leaf, biological rep 2 GSE6893 Expression data for reproductive development in rice
21.1 99.2 GSM278855 KT95-418-non-infected, biological rep3 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
19.8 99.1 GSM159180 Mature leaf, biological rep 1 GSE6893 Expression data for reproductive development in rice
18.2 98.9 GSM278845 WuYun3-RSV infected, biological rep2 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
17.8 98.9 GSM159182 Mature leaf, biological rep 3 GSE6893 Expression data for reproductive development in rice
13.4 98.5 GSM278852 KT95-418-RSV infected, biological rep3 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
11.5 98.2 GSM278846 WuYun3-RSV infected, biological rep3 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
10.9 98.1 GSM159262 Drought stress, biological rep 1 GSE6901 Expression data for stress treatment in rice seedlings
10.6 98.1 GSM159263 Drought stress, biological rep 2 GSE6901 Expression data for stress treatment in rice seedlings
10.3 98.1 GSM159264 Drought stress, biological rep 3 GSE6901 Expression data for stress treatment in rice seedlings
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.23 7e-39 163 Os04g0405900 AK066299.1 - Hypothetical protein 3e+0 At5g55340 long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family protein C.G. S.X.
0.02 7e-5 50 Os02g0525600 AK060671.1 - Conserved hypothetical protein 2e-1 At1g01490 heavy-metal-associated domain-containing protein C.G. S.X.
0.02 1e-3 46 Os01g0641800 9629.m04342 - AAA ATPase, central region domain containingprotein 5e-2 At3g55460 SCL30 C.G. S.X.
0.02 1e-3 46 Os12g0556300 CA761349 - Hypothetical protein 6e-1 At2g35850 unknown protein C.G. S.X.
0.01 1e-3 46 Os12g0574900 AK102088.1 - Hypothetical protein 3e-7 At2g03667 asparagine synthase (glutamine-hydrolyzing) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 5e-1 36 Arabidopsis thaliana At1g07950 837310 surfeit locus protein 5 family protein / SURF5 family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFO - - - C.G. S.X.
0.02 8e-1 36 Glycine max PsAffx.psHB007xG03f_at PsAffx.psHB007xG03f - - 5e+0 At1g58684 40S ribosomal protein S2, putative C.G. S.X.
0.24 6e-27 121 Hordeum vulgare Contig9566_at Contig9566 - - 3e+0 At3g48346 unknown protein C.G. S.X.
0.02 3e+0 34 Populus trichocarpa PtpAffx.222831.1.S1_at pmrna40506 hypothetical protein - 7e+0 At3g51190 structural constituent of ribosome C.G. S.X.
0.04 2e-4 48 Triticum aestivum Ta.23341.1.S1_at CA689506 - - 4e+0 At4g17900 zinc-binding family protein C.G. S.X.
0.02 3e+0 32 Vitis vinifera 1621029_at CD005131 - - 1e+0 At4g13955 - C.G. S.X.
0.03 1e-3 44 Zea mays Zm.11967.1.A1_at BM382240 Hypothetical LOC542169 - 7e-5 At1g05180 AXR1 (AUXIN RESISTANT 1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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