CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0522000

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.83 95.8 Os02g0522000 AK101294.1 - Retrotransposon gag protein family protein 3e+0 At4g22850 - S.X. H.G.
0.67 87.2 Os01g0891600 NM_190227.1 - - 1e-1 At1g20030 pathogenesis-related thaumatin family protein S.X. H.G.
0.62 81.5 Os09g0458600 AK066473.1 - Hypothetical protein 2e+0 At5g39650 unknown protein S.X. H.G.
0.60 79.7 Os03g0249600 9631.m01397 - - 2e-1 At4g24150 AtGRF8 (GROWTH-REGULATING FACTOR 8) S.X. H.G.
0.56 76.3 Os02g0125500 9630.m00232 - - 7e-1 At2g15830 unknown protein S.X. H.G.
0.55 73.7 Os04g0151300 9632.m00563 - - 3e-1 At1g78620 integral membrane family protein S.X. H.G.
0.55 73.7 Os04g0155200 9632.m00628 - Conserved hypothetical protein 5e-2 At1g64330 myosin heavy chain-related S.X. H.G.
0.53 71.3 Os05g0118600 9633.m00186 - - 7e-1 At5g13910 LEP (LEAFY PETIOLE) S.X. H.G.
0.47 62.3 Os07g0690800 9635.m04962 - - 3e-1 At1g47380 protein phosphatase 2C-related / PP2C-related S.X. H.G.
0.47 62.3 Os10g0373800 NM_196137.1 - - 2e+0 At5g14100 ATNAP14 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
40.3 99.9 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
35.6 99.8 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
29.9 99.7 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.4 99.6 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.2 99.6 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.5 99.5 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.5 99.5 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.2 99.4 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.5 99.4 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.8 99.3 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.08 2e-61 238 Os02g0522100 AK100876.1 - Conserved hypothetical protein 5e+0 At5g39850 40S ribosomal protein S9 (RPS9C) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 3e+0 34 Arabidopsis thaliana At4g22850 828384 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOPMFA - - - C.G. S.X.
0.02 9e-1 36 Glycine max PsAffx.psMC008xL05f_s_at PsAffx.psMC008xL05f - - 1e+1 At5g38160 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein C.G. S.X.
0.02 1e+0 34 Hordeum vulgare rbah25c12_at rbah25c12 - - 2e+1 At5g51040 unknown protein C.G. S.X.
0.03 9e-1 36 Populus trichocarpa PtpAffx.218254.1.S1_x_at pmrna33806 hypothetical protein - 3e+0 At4g33310 unknown protein C.G. S.X.
0.02 1e-2 42 Triticum aestivum Ta.4458.2.S1_at BJ257699 - - 4e+0 Atmg00690 - C.G. S.X.
0.02 2e-1 36 Vitis vinifera 1614885_at BQ800026 hypothetical protein LOC100248981 - 9e+0 At5g37240 unknown protein C.G. S.X.
0.01 1e+0 34 Zea mays Zm.5875.1.A1_at CA402986 hypothetical protein LOC100193662 - 7e+0 At3g15640 cytochrome c oxidase family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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