CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0498800

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.89 96.9 Os02g0498800 9630.m02821 - - 8e-1 At2g18550 HB-2 (HOMEOBOX-2) S.X. H.G.
0.41 52.4 Os01g0311400 NM_183695.1 - Zn-finger, RING domain containing protein 5e+0 At5g43410 ethylene-responsive factor, putative S.X. H.G.
0.40 51.1 Os04g0495000 9632.m03982 - Galactose-binding like domain containing protein 4e-2 At1g80240 unknown protein S.X. H.G.
0.38 46.9 Os08g0151900 9636.m00489 - - 2e+0 At1g16820 vacuolar ATP synthase catalytic subunit-related / V-ATPase-related / vacuolar proton pump-related S.X. H.G.
0.37 45.0 Os05g0232500 AK069430.1 - Ubiquitin-conjugating enzymes domain containingprotein 3e-4 At3g15355 UBC25 (UBIQUITIN-CONJUGATING ENZYME 25) S.X. H.G.
0.37 45.0 Os01g0171600 9629.m00699 - - 6e+0 At2g42000 plant EC metallothionein-like family 15 protein S.X. H.G.
0.36 44.0 Os04g0447500 AK064090.1 - NADPH-dependent codeinone reductase (EC 1.1.1.247) 7e-1 At1g59950 aldo/keto reductase, putative S.X. H.G.
0.33 38.8 Os10g0172300 9638.m00790 - - 2e+0 At4g30590 plastocyanin-like domain-containing protein S.X. H.G.
0.32 36.3 Os06g0656600 9635.m03964 - - 5e-9 At5g67590 FRO1 (FROSTBITE1) S.X. H.G.
0.32 36.3 Os10g0350400 NM_195939.1 - Ribosomal protein S12/S23 family protein 7e+0 At5g08060 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
88.6 100.0 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
28.2 99.6 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
17.0 98.8 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
15.7 98.7 GSM281583 Rice Zhonghua11, biological rep1 GSE11175 Comparison of transcriptome profile between wild-type and dst mutant plants
11.5 98.2 GSM281585 Rice Zhonghua11, biological rep3 GSE11175 Comparison of transcriptome profile between wild-type and dst mutant plants
10.2 98.0 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.1 98.0 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.1 98.0 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.4 97.9 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.2 97.9 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 4e-4 46 Os09g0271000 AK102955.1 - Conserved hypothetical protein 2e+0 At5g55890 unknown protein C.G. S.X.
0.03 1e-1 38 Os09g0438100 AK063180.1 - Conserved hypothetical protein 1e-1 At1g07950 surfeit locus protein 5 family protein / SURF5 family protein C.G. S.X.
0.02 1e-1 38 Os07g0693800 AK061531.1 - Omega-3 fatty acid desaturase, chloroplastprecursor (EC 1.14.19.-) 2e-17 At5g05580 FAD8 (FATTY ACID DESATURASE 8) C.G. S.X.
0.01 1e-1 38 Os02g0147800 AK106225.1 - Homeo protein (Fragment) 3e-1 At5g07600 oleosin / glycine-rich protein C.G. S.X.
0.01 1e-1 38 Os04g0129500 AK071986.1 - Sec23/Sec24 zinc finger domain containing protein 7e-31 At3g07100 protein transport protein Sec24, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 8e-1 34 Arabidopsis thaliana At2g18550 816370 HB-2 (HOMEOBOX-2) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. - - - C.G. S.X.
0.04 1e+0 34 Glycine max HgAffx.6699.1.S1_at CB825512 - - 4e+0 At4g34800 auxin-responsive family protein C.G. S.X.
0.03 2e+0 32 Hordeum vulgare Contig23311_at Contig23311 - - 6e+0 At5g19315 - C.G. S.X.
0.04 1e+0 34 Populus trichocarpa PtpAffx.210630.1.S1_at pmrna20852 hypothetical protein - 4e-1 At5g59510 RTFL5 (ROTUNDIFOLIA LIKE 5) C.G. S.X.
0.05 8e-4 44 Triticum aestivum TaAffx.107896.1.S1_at CA693713 - - 4e+0 At5g23460 unknown protein C.G. S.X.
0.04 9e-1 32 Vitis vinifera 1607731_at CD798475 - - 4e-9 At5g10730 binding / catalytic/ coenzyme binding C.G. S.X.
0.05 6e-9 59 Zea mays Zm.18771.1.A1_at CO522810 hypothetical protein LOC100216939 - 3e+0 At5g54640 RAT5 (RESISTANT TO AGROBACTERIUM TRANSFORMATION 5) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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