CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0454500

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os02g0454500 AK064156.1 - Membrane bound O-acyl transferase, MBOAT familyprotein 5e-5 At5g55360 long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family protein S.X. H.G.
0.71 89.6 Os03g0155300 AY046929.1 - Expansin/Lol pI family protein 6e-7 At1g20190 ATEXPA11 (ARABIDOPSIS THALIANA EXPANSIN 11) S.X. H.G.
0.57 77.0 Os04g0132500 AK121779.1 - Protein kinase domain containing protein 5e-4 At3g24240 leucine-rich repeat transmembrane protein kinase, putative S.X. H.G.
0.44 58.1 Os06g0660200 AK101191.1 - Auxin efflux carrier component 2 (AtPIN2) (Auxinefflux carrier AGR) (Polar-auxin-transport effluxcomponent AGRAVITROPIC 1) (AtAGR1) (Ethylene insensitiveroot 1) (AtEIR1) (WAVY6) 1e-15 At1g70940 PIN3 (PIN-FORMED 3) S.X. H.G.
0.35 41.7 Os08g0532700 AK073978.1 - Peroxidase 55 precursor (EC 1.11.1.7) (AtperoxP55) (ATP20a) 4e-5 At5g58400 peroxidase, putative S.X. H.G.
0.30 32.7 Os01g0838200 AU075817 - Conserved hypothetical protein 1e+0 At4g28025 unknown protein S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
23.9 99.4 GSM275414 Azucena root tip_Before the wax layer_rep1 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
18.9 99.0 GSM275412 Azucena root tip Buckled at the wax layer_rep2 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
17.9 98.9 GSM275415 Azucena root tip_Before the wax layer_Rep2 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
14.9 98.6 GSM275416 Azucena root tip_Before the wax layer_Rep3 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
13.0 98.4 GSM275406 Azucena root tip_At the wax layer_rep2 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
12.2 98.3 GSM275410 Bala root tip_At the wax layer_rep3 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
10.8 98.1 GSM275407 Azucena root tip_At the wax layer_rep3 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
10.8 98.1 GSM275408 Bala root tip_At the wax layer_rep1 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
10.6 98.1 GSM275413 Azucena root tip_Buckled at the wax layer_rep3 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
10.0 98.0 GSM261999 IAC165, 2 days after mock-infection, biological replicate #2 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.23 1e-13 79 Os07g0540000 9635.m03515 - - 3e-2 At1g62333 unknown protein C.G. S.X.
0.17 2e-34 149 Os04g0277400 AK108867.1 - Membrane bound O-acyl transferase, MBOAT familyprotein 2e-4 At5g55340 long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family protein C.G. S.X.
0.14 2e-6 56 Os04g0481900 9632.m03856 - Conserved hypothetical protein 8e+0 At4g38090 unknown protein C.G. S.X.
0.07 3e-8 61 Os04g0481800 AK109152.1 - Membrane bound O-acyl transferase, MBOAT familyprotein 1e+1 At4g38090 unknown protein C.G. S.X.
0.02 6e-3 44 Os08g0244700 9636.m01473 - - 1e+0 At1g55160 unknown protein C.G. S.X.
0.01 6e-3 44 Os11g0646100 9639.m03934 - - 1e+0 At5g49240 APRR4 (PSEUDO-RESPONSE REGULATOR 4) C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 5e-5 50 Arabidopsis thaliana At5g55360 835629 long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family protein F:acyltransferase activity;P:biological_process unknown;C:cellular_component unknown;BPOF - - - C.G. S.X.
0.02 3e-1 38 Glycine max GmaAffx.37263.1.S1_at CA783220 - - 2e-5 At3g56590 hydroxyproline-rich glycoprotein family protein C.G. S.X.
0.02 2e+0 34 Hordeum vulgare HC107H05_SK_at HC107H05_SK - - 4e+0 At4g34590 GBF6 (G-BOX BINDING FACTOR 6) C.G. S.X.
0.04 2e-2 42 Populus trichocarpa PtpAffx.208129.1.S1_at pmrna16143 hypothetical protein - 3e-2 At5g28288 - C.G. S.X.
0.03 8e-1 36 Triticum aestivum TaAffx.87096.1.S1_at CA595865 - - 7e-2 At3g26520 TIP2 (TONOPLAST INTRINSIC PROTEIN 2) C.G. S.X.
0.02 4e+0 32 Vitis vinifera 1622710_at CK138248.1 - - 3e+0 At5g08505 - C.G. S.X.
0.02 1e+0 34 Zea mays Zm.13660.1.S1_at AY107143.1 - - 6e-2 At1g62480 vacuolar calcium-binding protein-related C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage