CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0448000

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os02g0448000 9630.m02338 - Protein of unknown function DUF296 domaincontaining protein 8e-6 At4g22810 DNA-binding protein-related S.X. H.G.
0.60 79.7 Os05g0148900 AK120912.1 - Glutathione-S-transferase 19E50 1e+0 At1g03860 ATPHB2 (PROHIBITIN 2) S.X. H.G.
0.53 71.3 Os12g0640700 AK108649.1 - N/apple PAN domain containing protein 8e-1 At5g44500 small nuclear ribonucleoprotein associated protein B, putative / snRNP-B, putative / Sm protein B, putative S.X. H.G.
0.50 68.0 Os01g0653200 AK110920.1 - Glycosyl transferase, group 1 domain containingprotein 9e-1 At1g71910 unknown protein S.X. H.G.
0.46 60.9 Os04g0534200 AK109583.1 - Receptor kinase-like protein 8e-4 At5g41180 leucine-rich repeat protein kinase, putative S.X. H.G.
0.38 46.9 Os07g0104400 9635.m00042 - Haem peroxidase, plant/fungal/bacterial familyprotein 2e-3 At5g40150 peroxidase, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
21.4 99.2 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.3 99.1 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.3 99.1 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.4 98.9 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.1 98.5 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.9 98.3 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
11.8 98.3 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.7 98.2 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.7 98.1 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.9 98.0 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.30 4e-43 176 Os02g0820800 9630.m05730 - Protein of unknown function DUF296 domaincontaining protein 3e-2 At4g14465 DNA-binding protein-related C.G. S.X.
0.26 1e-18 95 Os08g0563200 AK110263.1 - Protein of unknown function DUF296 domaincontaining protein 2e-1 At1g76500 SOB3 (SUPPRESSOR OF PHYB-4#3) C.G. S.X.
0.23 2e-20 101 Os06g0136900 AK107405.1 - Protein of unknown function DUF296 domaincontaining protein 7e-4 At4g17800 DNA-binding protein-related C.G. S.X.
0.17 7e-20 99 Os08g0159700 AK109080.1 - Protein of unknown function DUF296 domaincontaining protein 6e-1 At2g41225 unknown protein C.G. S.X.
0.17 2e-11 71 Os02g0713700 9630.m04710 - Protein of unknown function DUF296 domaincontaining protein 3e+0 At5g03240 UBQ3 (POLYUBIQUITIN 3) C.G. S.X.
0.17 2e-11 71 Os03g0270000 AK106069.1 - Protein of unknown function DUF296 domaincontaining protein 3e-3 At1g76500 SOB3 (SUPPRESSOR OF PHYB-4#3) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 8e-6 52 Arabidopsis thaliana At4g22810 828380 DNA-binding protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOBFV - - - C.G. S.X.
0.22 2e-13 77 Glycine max GmaAffx.5944.2.S1_at BQ785950 - - 1e+0 At4g22810 DNA-binding protein-related C.G. S.X.
0.04 1e-3 44 Hordeum vulgare HM02O03r_s_at HM02O03r - - 6e-2 At3g60540 sec61beta family protein C.G. S.X.
0.07 1e-2 42 Populus trichocarpa PtpAffx.203194.1.S1_s_at pmrna6331 hypothetical protein - 3e-5 At2g45430 DNA-binding protein-related C.G. S.X.
0.43 9e-83 307 Triticum aestivum Ta.26071.1.A1_at CD452464 - - 1e-1 At2g45430 DNA-binding protein-related C.G. S.X.
0.03 6e-1 34 Vitis vinifera 1622095_s_at BQ795159 hypothetical protein LOC100247888 - 5e+0 At4g39795 senescence-associated protein-related C.G. S.X.
0.03 2e-1 36 Zea mays Zm.4017.2.S1_at CD052379 - - 1e-19 At3g57870 SCE1 (SUMO CONJUGATION ENZYME 1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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